Pairwise Alignments

Query, 467 a.a., UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-me so-diaminopimelate ligase (EC 6.3.2.-) from Variovorax sp. SCN45

Subject, 505 a.a., UDP-N-acetylmuramate--L-alanine ligase from Synechocystis sp000284455 PCC 6803

 Score =  119 bits (298), Expect = 2e-31
 Identities = 121/437 (27%), Positives = 185/437 (42%), Gaps = 68/437 (15%)

Query: 4   HILGICGTFMGGLAALAREAGHRVTGCDAGVYPPMSDQLRSLGIDLIEGFGAEQLKLSPD 63
           H LGI G  M  LA +  +    V+G D      ++D+L S+G  + +    +Q+  + D
Sbjct: 17  HFLGIGGIGMSALAYVLAKRHLPVSGSDLR-RTHITDRLESVGAKIFQ----DQVPENLD 71

Query: 64  MFVIGNVVSRARLPDGSPKFPL-MEAILDAGKPYTSGPQWLAEHVL-------------- 108
            F    V     LP GSP   L +E I ++     +G      H L              
Sbjct: 72  YFQSLQVNPAVALPTGSPGSGLTLEQIAESASNGVNGNGRYQTHCLPQVVCSTAINEGNL 131

Query: 109 --QGRHV---------------------LAVAGTHGKTTTTSMLAWVLEKGGKAPGFLVG 145
             QG                        + VAGTHGKTTT+S++ +VL++ G  P  +VG
Sbjct: 132 EYQGAIAKNCPIYHRSDILAALIAESRGIGVAGTHGKTTTSSLIGYVLKEAGLDPTIVVG 191

Query: 146 GVPLDFGVSARLGDGTAFVIEADEYDTAFFDKRSKFVHYRPRTAVLNNLEFDHADIFDDL 205
           G    +  +A LG G   V E DE D            + P   ++ N+E DH D +  L
Sbjct: 192 GEVDAWQGNAYLGSGEYLVAEVDESD-------GSLTKHHPEIGIVTNIELDHPDHYSTL 244

Query: 206 AAIERQFHHLVRTVPSTGRLVVNATE-ESLRHVLSQGCWSELARFGAGGEWQAR-----G 259
           A +   F    RT  S  + ++   +   +R  LS      L       ++QAR      
Sbjct: 245 AEVVEIF----RTFESHCQTLIGCLDCGVVRQHLSPTITYSLENH-PEADYQARQIKRQA 299

Query: 260 SHDAFDVLRQGEVIGRVEWELSGLHNQMNALAAIAAADHVGVPPAEAARALGSFRNVRRR 319
             +  +V  +G  +G +   L G HN  NALAA+A    +G+     A+A+ SF   +RR
Sbjct: 300 HGNEVEVWERGVCLGTMTVTLPGDHNISNALAAVAVGRLLGLDFPVIAQAIASFNGAKRR 359

Query: 320 MELRGTVERSGGSITVYDDFAHHPTAIRTTLDGLRNKLDAAGKKSERILAAFEPRSNTMK 379
            E +G        IT  DD+AHHP+ +  TL   + K+     K ER++A F+P   + +
Sbjct: 360 FECKGYC----NGITFIDDYAHHPSELLATLAAAKQKVTHG--KYERVVAIFQPHRYS-R 412

Query: 380 LGVMAAQLPWSLEAADL 396
                A+   + + ADL
Sbjct: 413 THTFMAEFATAFKDADL 429