Pairwise Alignments

Query, 516 a.a., Two-component system response regulator protein from Variovorax sp. SCN45

Subject, 479 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  273 bits (699), Expect = 8e-78
 Identities = 171/508 (33%), Positives = 282/508 (55%), Gaps = 51/508 (10%)

Query: 13  AQILVIDDEPDLRTLYELTLLREGYRVEAAGSVSEAWQHLEAGRFDAVITDMRLPDGQGM 72
           +++L+++D+  LR     TL   GY    A    +A   L++   D V++D+++    G+
Sbjct: 6   SKVLIVEDDEGLREALIDTLALAGYEWLEADCAEDALLKLKSHSVDIVVSDVQMAGMGGL 65

Query: 73  EIIHRIQKDQRSERCVVMTAYGSAENAVEALKAGAFDYLTKPVDLKQFRAVVASAVQARN 132
            ++  I++   +   ++MTAY + ++AV A+K GA DY+ KP     F   V   + +R 
Sbjct: 66  ALLRSIKQHWPNLPVLLMTAYANIQDAVSAMKDGAIDYMAKP-----FAPEVLLNMVSRY 120

Query: 133 AAQQPAKSVPVVAAGNNDAPLVTSDSGVAALDRLVGDSEPMRLVKSRIAKVARGMAPVLV 192
           A                  P+ + D+G    D +V D++ ++L+ +   KVA+  A V++
Sbjct: 121 A------------------PVKSDDNG----DAVVADTKSLKLL-ALADKVAKTDANVMI 157

Query: 193 RGESGTGKELVARAVHACSQRSDGPFVAVNCGAIPENLLEAEFFGARKGSYTGSAQDRDG 252
            G SG+GKE+++R +H  S R +GPF+A+NC AIP+N+LEA  FG  KG++TG+ Q   G
Sbjct: 158 LGPSGSGKEVMSRYIHNASPRKEGPFIAINCAAIPDNMLEATLFGYEKGAFTGAVQACPG 217

Query: 253 YFQAARGGTLFLDEIGDLPLAMQSKLLRAIQERSVRSIGSTQEDTVDVRIVSATHKDLHS 312
            F+ A+GGT+ LDEI ++ L +Q+KLLR +QER V  +GS +   +DVR+++ +++DL  
Sbjct: 218 KFEQAQGGTILLDEISEMDLNLQAKLLRVLQEREVERLGSRKSIKLDVRVLATSNRDLKQ 277

Query: 313 EVQAGRFRQDLFYRLNVIEIAVPALRDRREDLPALCAALLSRIAHDAGMPVPHLSDDLLR 372
            VQAG FR+DL+YRLNV  +  PAL +R++D+  L   L+ R     G+PVP ++ + + 
Sbjct: 278 YVQAGHFREDLYYRLNVFPLTWPALCERKDDIEPLANHLIERHCKKLGLPVPSIAPNAIT 337

Query: 373 RLGMHPLDGNVRELENLLHRAVALNDGDEL---HLDLMGGFTPSAEAAASAPAPLMPEIT 429
           +L  +P  GNVREL+N++ RA+ L++   +   H+ L G     A +       L   + 
Sbjct: 338 KLLNYPWPGNVRELDNVVQRALILSENGHIQSEHILLEGVDWHDASS-------LQQAVA 390

Query: 430 TPAMLMPAPAPVAPPKPAPPPL----------PSDLQAYLDQQEREILVRALHDSGFNRT 479
             +M  P   PVA P+   P +           S L   L  QE  I++  L +    R 
Sbjct: 391 GESMAAPQIKPVAEPEVFKPLVQGGGQNSSSQSSGLGGELRDQEFAIILDTLAECQGRRK 450

Query: 480 AAAARLGMSLRQIRYRIARL---GITTP 504
             A +LG+S R +RY++A++   GI  P
Sbjct: 451 EMAEKLGISPRTLRYKLAKMRDAGIDIP 478