Pairwise Alignments

Query, 516 a.a., Two-component system response regulator protein from Variovorax sp. SCN45

Subject, 460 a.a., Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) from Rhodospirillum rubrum S1H

 Score =  291 bits (746), Expect = 3e-83
 Identities = 184/492 (37%), Positives = 265/492 (53%), Gaps = 36/492 (7%)

Query: 12  PAQ-ILVIDDEPDLRTLYELTLLREGYRVEAAGSVSEAWQHLEAGRFDAVITDMRLPDGQ 70
           PAQ +L++DD+  +R +    L +EG RV  A    EA +     R D V+ D+R+P   
Sbjct: 4   PAQTVLIVDDDEAIRQMLSAFLSKEGLRVVTARDGLEAIEVFRLQRTDVVLLDIRMPRMN 63

Query: 71  GMEIIHRIQKDQRSERCVVMTAYGSAENAVEALKAGAFDYLTKPVDLKQFRAVVASAVQA 130
           G+E    I +  R    ++MTA+     AV+A+K GAFDY+ KP DL++ R +V  A++ 
Sbjct: 64  GLEAAKAILEMDRGTAVILMTAFAEVCTAVQAIKDGAFDYVIKPFDLEEIRLLVRRALEI 123

Query: 131 RNAAQQPAKSVPVVAAGNNDAPLVTSDSGVAALDRLVGDSEPMRLVKSRIAKVARGMAPV 190
           R+                    L    S     + ++ D+  M  ++  IAKVAR  A V
Sbjct: 124 RSMRADIVS-------------LRRELSERYGAEGILTDNPKMMDLRQTIAKVARSQATV 170

Query: 191 LVRGESGTGKELVARAVHACSQRSDGPFVAVNCGAIPENLLEAEFFGARKGSYTGSAQDR 250
           L++GESGTGKELVA +VH  S R+ GPF+ VNC AIPE LLE+EFFG  KG++TG+A  R
Sbjct: 171 LIQGESGTGKELVAASVHYGSPRATGPFIRVNCAAIPEGLLESEFFGHEKGAFTGAATRR 230

Query: 251 DGYFQAARGGTLFLDEIGDLPLAMQSKLLRAIQERSVRSIGSTQEDTVDVRIVSATHKDL 310
            G F+ A  GTLFLDEIG++  A+Q KLLR +QER    +G ++    DVRIV+AT++DL
Sbjct: 231 RGRFEQAEHGTLFLDEIGEISPALQVKLLRVLQEREYERVGGSEPIPADVRIVAATNRDL 290

Query: 311 HSEVQAGRFRQDLFYRLNVIEIAVPALRDRREDLPALCAALLSRIAHDAGMPVPHLSDDL 370
            + ++ G FRQDLF+RLNV+ +    LRDR ED+  L    L R A D  + +       
Sbjct: 291 EAMIREGTFRQDLFFRLNVVALKTIPLRDRPEDIRLLADHFLGRFAADNNVVIRGFDPAA 350

Query: 371 LRRLGMHPLDGNVRELENLLHRAVALNDGDELHLDLMGGFTPSAEAAASAPAPLMPEITT 430
           L  +  +P  GNVREL N + RAV ++ G+ +  D +       E AA            
Sbjct: 351 LDCMLAYPWPGNVRELVNAVERAVVMSTGNVILRDDLPENIICGERAAFV---------- 400

Query: 431 PAMLMPAPAPVAPPKPAPPPLPSDLQAYLDQQEREILVRALHDSGFNRTAAAARLGMSLR 490
            + L+P    + P           L+    + E  ++  AL  +G NR   A +LG+S R
Sbjct: 401 -SELLPDGEAIRP-----------LREMASEFETRVIRLALARNGGNRARTAIQLGISRR 448

Query: 491 QIRYRIARLGIT 502
            + Y++    IT
Sbjct: 449 ALLYKLQEYAIT 460