Pairwise Alignments

Query, 516 a.a., Two-component system response regulator protein from Variovorax sp. SCN45

Subject, 462 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  285 bits (728), Expect = 3e-81
 Identities = 174/493 (35%), Positives = 267/493 (54%), Gaps = 40/493 (8%)

Query: 15  ILVIDDEPDLRTLYELTLLREGYRVEAAGSVSEAWQHLEAGRFDAVITDMRLPDGQGMEI 74
           IL+I+D+   + +    L   GYRV A     +  + + +G FD V+TD+ LP   G+E 
Sbjct: 5   ILLIEDDTAFQGMLREALEERGYRVTAVNRAEDGVRIVRSGDFDLVLTDVMLPGISGVEA 64

Query: 75  IHRIQKDQRSERCVVMTAYGSAENAVEALKAGAFDYLTKPVDLKQFRAVVASAVQARNAA 134
           I R+++       VVMTA+ + E A+EA+K GA+D+ +KP  LK+   V+  A++ R   
Sbjct: 65  IPRLREAAPGTDIVVMTAFSTRELALEAVKLGAYDFFSKPFSLKELDIVIRRAMEKR--- 121

Query: 135 QQPAKSVPVVAAGNNDAPLVTSDSGVAALDRLVGDSEPMRLVKSRIAKVARGMAPVLVRG 194
           +   + V +      D P            R+VG+S  MR VK+ + ++A   + VL+ G
Sbjct: 122 RMQGEIVALRETLRRDTPT----------SRIVGESRAMRDVKALLERIAPLESTVLIMG 171

Query: 195 ESGTGKELVARAVHACSQRSDGPFVAVNCGAIPENLLEAEFFGARKGSYTGSAQDRDGYF 254
           ESGTGKEL+A  + A S R+  PFV VNC AIPE+L E E FG  KG++TG+A    G F
Sbjct: 172 ESGTGKELIADTIRALSPRAANPFVKVNCAAIPEHLFENELFGHEKGAFTGAATAMPGKF 231

Query: 255 QAARGGTLFLDEIGDLPLAMQSKLLRAIQERSVRSIGSTQEDTVDVRIVSATHKDLHSEV 314
           + A+GG + LDEIGD+PLA+Q KLLR ++++ V  +G      +DVRI++AT+++L   V
Sbjct: 232 EQAQGGMIMLDEIGDMPLAIQPKLLRVVEQKQVERLGGRAPVPLDVRIIAATNQNLAERV 291

Query: 315 QAGRFRQDLFYRLNVIEIAVPALRDRREDLPALCAALLSRIAHDAGMPVPHLSDDLLRRL 374
           +   FR+DL+YRL+V  + +P LRDR++D+P L    ++++    G+PV  LS D +  L
Sbjct: 292 REKAFREDLYYRLSVAVVLIPPLRDRKDDIPLLAQYFVNKLEGTLGLPVHGLSPDAIAVL 351

Query: 375 GMHPLDGNVRELENLLHRAVALNDGDELHLDLMGGFTPSAEAAASAPAPLMPEITTPAML 434
             H   GNVR+L N+L RA    DG     D+M        A  +A    + + T   M 
Sbjct: 352 MDHDWPGNVRQLANVLERAAIAADGLICARDVMA-------AIGTARGSNVDKATLSGM- 403

Query: 435 MPAPAPVAPPKPAPPPLPSDLQAYLDQQEREILVRALHDSGFNRTAAAARLGMSLRQIRY 494
                              DL+  L   ER +++ AL      +T AA  LG++ + +  
Sbjct: 404 -------------------DLKTTLRMVERNLILDALRRCHGRQTEAAVLLGLTPKNLWA 444

Query: 495 RIARLGITTPNGD 507
           ++ + GI     D
Sbjct: 445 KLRKHGIRAGTED 457