Pairwise Alignments

Query, 271 a.a., Inner membrane protein YpjD from Variovorax sp. SCN45

Subject, 264 a.a., inner membrane protein YpjD from Vibrio cholerae E7946 ATCC 55056

 Score = 99.0 bits (245), Expect = 9e-26
 Identities = 80/273 (29%), Positives = 133/273 (48%), Gaps = 21/273 (7%)

Query: 2   ILAIPSPLGVALGIATAVAYGFVAAAGARMSRQATQWALGI---AWLLHALALAHGLIGS 58
           ++AI + +   L IAT V  G V   G R        A+ +    WLL  L L H    +
Sbjct: 4   LIAIAAAMLYLLSIATIVP-GLVNQTGIRAKTVFISAAIALLFHGWLLSDLIL-HSSGQN 61

Query: 59  EPRFGFAPALSVTAWLVLTVYAVESRMYPQLKVRRALAWLGAAAVLLAILFAGSPL-HVS 117
                 A  +S    L +++   ++R++  L V  + + +  +A   A    G+ + H+ 
Sbjct: 62  LSILNVASLISFIISLAMSLAMFKTRLWFLLPVAYSFSAINLSA---ATFLPGTFITHLE 118

Query: 118 ASPWLPLHLALGIASYGLFGAAVVHA----WLITRAEKQIRLATAEPHQGGVPLLTLERL 173
           + P L LH++L + SY       ++A    WL  + + + ++ +  P+    PLL +ER 
Sbjct: 119 SDPKLLLHISLALFSYSTLSIGALYALQLAWLDHKLKSK-KVFSINPNLP--PLLLVERQ 175

Query: 174 TFRFVTAGFVLLSATLLAGLLFSEQLYGTAGRFWKWDHKTTFSVLAWLTFAVLLIGRARF 233
            F+ +  G +LL+ TLL G +F + ++          HK   S +AW+ +++LL G  R 
Sbjct: 176 LFKIILIGNLLLTGTLLTGFIFVQDMFAQGKA-----HKGILSFVAWIVYSILLWGHYRK 230

Query: 234 GWRGRTARRVLYAGSALLLLAYVGSRFVLEVVL 266
           GWRG+       AG+ LL LAY GSRFV E++L
Sbjct: 231 GWRGKKVTWFAVAGATLLTLAYFGSRFVREIIL 263