Pairwise Alignments

Query, 422 a.a., Conjugative transfer protein TrbI from Variovorax sp. SCN45

Subject, 390 a.a., VirB10-like transmembrane secretion protein from Sinorhizobium meliloti 1021

 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 98/378 (25%), Positives = 152/378 (40%), Gaps = 55/378 (14%)

Query: 34  LNRRTLAMLVGGLSVAVLGATIWSLQPQQRGAGEQTELYNVDRVSKSEGLDGLPTDYSKL 93
           L R  +A+ V    VA +G  +WS+     G G++ +    +RV   +  +  P    KL
Sbjct: 28  LKRGAVALAV----VAFVGFALWSMG----GEGKRQDNAQPERVVIRQTTNFEPAK-EKL 78

Query: 94  PPKTPELGPPLPGDLGPAIVASQQPVTPTYAPPGHDPADALRKEAEAAAASAVFFRSGQG 153
            P  P     LP  +    V  + P+  +                 A  A  + + SGQ 
Sbjct: 79  EPVQPVPEVKLPTPVVTEEVKEEDPLLDS-----------------ARRAPVIAYSSGQK 121

Query: 154 KGTAPAAVQVAAAAPGSALAGFDPLATGPASMAAQPADPTAIQN--RQDQKEAFLKGGST 211
             T+    + +   P SA + F PL           AD        R  + E   + G+ 
Sbjct: 122 NATSH---RDSENPPISADSNFIPLDGDTMGQNTANADEQRFNGLLRPTRLEGS-RAGTL 177

Query: 212 GTRNSGHLALPASPYQVMASTVIAGALVTGIKSDLPGDVIATVTEPVYDTATGKFLLIPQ 271
           G RN          + V   T I   L T + SD PG     V   V     G+ +L+ +
Sbjct: 178 GNRN----------FIVAMGTSIPCVLETAMASDQPGFTSCVVNRDVLSD-NGRVVLMEK 226

Query: 272 GSRILGRYNSQVSYGQSRVQVVWNRIILPDTSSLTLDNLVGTDPAGYAGQEDSVDYHWGR 331
           G++++G Y   +  GQ R+ V+W R   P+   +TL +   TD  G AG +  VD HW  
Sbjct: 227 GTQVVGEYRGGLQRGQKRLFVLWYRAKTPNGVIVTLAS-PATDALGRAGVDGYVDTHWWE 285

Query: 332 IFAGAALTTLLGVGAELAA---PENRQDGNRIVIAGRDSAQDSINQVGQEMTRRNMNIQP 388
            F  A L +++G     A+    ++  D      AG+ +A  ++ Q        ++NI P
Sbjct: 286 RFGSALLLSIVGDATSYASSRLQDSDVDAQNTTSAGQQAAAVAVEQ--------SINIPP 337

Query: 389 TLTERPGLPVRIIVNRDL 406
           TL +  G  V I V RDL
Sbjct: 338 TLNKHQGELVSIFVARDL 355