Pairwise Alignments

Query, 354 a.a., Conjugative transfer protein TrbB from Variovorax sp. SCN45

Subject, 497 a.a., CpaF2 pilus assembly protein from Sinorhizobium meliloti 1021

 Score =  142 bits (359), Expect = 1e-38
 Identities = 106/303 (34%), Positives = 157/303 (51%), Gaps = 23/303 (7%)

Query: 25  GPLIATALEDPDVVEIMLNPDRTLWVDRLSSGRAP-MGVEMPEADGERIIRL---VAAHV 80
           GPL      D D+ +IM+N    ++++   +GR    G+     D E+++ +   + + V
Sbjct: 140 GPLEPLLARD-DIADIMVNGANQVFIE--VNGRVQETGIRF--RDNEQLLNICQRIVSQV 194

Query: 81  GAEVHRGQPLLSAELPETGERFEGILPPAA-PGPAFALRKRAIGVIPLERYVVEGMMTAA 139
           G  V    P+  A L + G R   I PP A  GP   +RK     + L++ V  G ++  
Sbjct: 195 GRRVDESSPICDARLGD-GSRVNVIAPPLAIDGPTLTIRKFKKEKLTLDQLVRFGSISPE 253

Query: 140 QAGFLVRAVRERQNVLIAGATSSGKTTLANALLAEIAATGDRVLVLEDTIELQCAARDHV 199
            A  L    R R NVLI+G T SGKTTL N L   I   G+RV+  ED  ELQ      V
Sbjct: 254 GAEVLKIIGRVRCNVLISGGTGSGKTTLLNCLTGYIDH-GERVITCEDAAELQLQQPHVV 312

Query: 200 PLRTR------SGVVSMTQLVRSSMRLRPDRVVVGEVRGAEALDLIKVWGTGHPGGIATI 253
            L TR       G ++M  LV++ +R+RP+R++VGEVRG EA DL++   TGH G + T+
Sbjct: 313 RLETRPPNIEGQGEITMRNLVKNCLRMRPERIIVGEVRGPEAFDLLQAMNTGHDGSMGTL 372

Query: 254 HAGSALGALLRMEQLILEVAVNPP----RALIAEAVNVVIHIAG-RGRKRRIESIARVVG 308
           HA S   A+ R+E +I     + P    R ++  +V+V++  A  R   RRI  I  V+G
Sbjct: 373 HANSPREAMARIEAMITMGGSSLPAKTIREMLVSSVDVIVQAARLRDGSRRITHITEVLG 432

Query: 309 FDG 311
            +G
Sbjct: 433 MEG 435