Pairwise Alignments

Query, 354 a.a., Conjugative transfer protein TrbB from Variovorax sp. SCN45

Subject, 549 a.a., Flp pilus assembly complex ATPase component TadA from Methanococcus maripaludis S2

 Score =  112 bits (279), Expect = 3e-29
 Identities = 88/302 (29%), Positives = 144/302 (47%), Gaps = 25/302 (8%)

Query: 27  LIATALEDPDVVEIMLNP-DRTLWVDRLSSGRAPMGVEMPEADGERIIRLVAAHVGAEVH 85
           L+   L D  + E+M+N  +   +V           + +   +  R++  +A   G  + 
Sbjct: 169 LLEIPLNDSKLEEVMVNGVESPSFVFHRKYQMCETNIRLDRHEATRVVESIAYLAGRTID 228

Query: 86  RGQPLLSAELPETGERFEGILPPAA-PGPAFALRKRAIGVIPLERYVVEGMMTAAQAGFL 144
              P+L A LP+ G R    +      G    +RK +   + +   +  G      A FL
Sbjct: 229 SRTPMLDAFLPD-GSRVNATMSDVTLGGNTITIRKFSEDPLTIVDLINFGTFDLELAAFL 287

Query: 145 VRAVR-----ERQNVLIAGATSSGKTTLANALLAEIAATGDRVLVLEDTIELQCAARDHV 199
            +AV      +  N LI G T SGKTT  N +++  +   DR++ +EDT ELQ      +
Sbjct: 288 WQAVEGYFGAKPANTLIVGGTGSGKTTTLN-VVSMFSMYTDRLVTIEDTPELQVPLTHLI 346

Query: 200 PLRTRSG-------VVSMTQLVRSSMRLRPDRVVVGEVRGAEALDLIKVWGTGHPGGIAT 252
            + TR G        ++M  L+++S+R+RPDR+ VGEVRG+EA  L+    TGH G   T
Sbjct: 347 KMITRPGRPGIQGYEITMDDLIKNSLRMRPDRIFVGEVRGSEAHSLLVAMNTGHDGCSGT 406

Query: 253 IHAGSALGALLRMEQLILEVAVNPPRALIAEAVNVVIHIAGRGR-KRRIESIARVVGFDG 311
           +HA SA  AL+R+        +NPP  +    ++ V  I  + R KR  +++ R++G   
Sbjct: 407 LHANSADEALIRL--------INPPMNVPKVMMSSVDFIINQQRIKRNKKTVRRILGVVE 458

Query: 312 VG 313
           +G
Sbjct: 459 IG 460