Pairwise Alignments

Query, 677 a.a., Coupling protein VirD4, ATPase required for T-DNA transfer from Variovorax sp. SCN45

Subject, 639 a.a., conjugal transfer protein TraG from Sinorhizobium meliloti 1021

 Score = 93.6 bits (231), Expect = 3e-23
 Identities = 104/417 (24%), Positives = 176/417 (42%), Gaps = 30/417 (7%)

Query: 146 HVLTFAPTRSGKGVGLVVPTLLSWPASAVVHDIKGENWQITAGWRSRF--SHCLLFNPTD 203
           H+L FA +   K    VVPT L +    +  D   E   +    R+R      ++ +PT+
Sbjct: 222 HMLFFAGSGGYKTTSNVVPTALRYTGPLICLDPSTEVAPMVVEHRTRVLGREVMVLDPTN 281

Query: 204 AKSAAYNPLLEVRRGAHEVRDVQNIADILVDPEGALEKR--NHWEKTSHALLVGAILHVL 261
                +N L  +     +  D+  IA +L+      E    ++++  +H LL G + HV+
Sbjct: 282 P-IMGFNVLDGIEHSRQKEEDIVGIAHMLLSESVRFESSTGSYFQNQAHNLLTGLLAHVM 340

Query: 262 ----YAGEDKTLRGVANFLSDPASPFELTLHRMMTTPHLMNGNGGSPHPVVASAAREVLN 317
               YAG  +TLR +   +S+P  P  L + R +           S    +        N
Sbjct: 341 LSPEYAGR-RTLRSLRQIVSEP-EPSVLAMLRDIQER--------SASTFIRETLGVFTN 390

Query: 318 KSDNERSGVLSTAMSFLGLYRDPTVAEVTSRCDWRIADLISAEHPVSLYLVVPPSDISRT 377
            ++   SGV STA          + A +     ++ +D++S +  V L +   P+ I R+
Sbjct: 391 MTEQTFSGVYSTASKDTQWLSLDSYAALVCGNAFKSSDIVSGKKDVFLNI---PASILRS 447

Query: 378 KPLIRLILNQIGRRLTESLDGSDGIERRHKLLLMLDEFPALGRLDFFETALAFMAGYGIR 437
            P I  ++  IG  +   +      +RR   L MLDE   LG +   E A      YGI 
Sbjct: 448 YPGIGRVI--IGSLINAMIQADGSFKRR--ALFMLDEVDLLGYMRLLEEARDRGRKYGIS 503

Query: 438 SFLIAQSLNQIDKAYGQNHSI--LDNCHVRVTFATNDERTAKRISETLGTAT-ELRAQRN 494
             L+ QSL Q+++ +G++ ++  +D C      A     TA+ IS   G  T E++    
Sbjct: 504 MMLLYQSLGQLERHFGRDGAVSWIDGCAFASYAAVKALDTARNISAQCGEMTVEVKGSSR 563

Query: 495 YAGHRLAPWLGHLMVSRQETARPLLTPGEVMQ-LPPDEAVVMVSSVAPIRAKKLRYY 550
             G            +     RPL+ P E+ Q +  DE +++V   +PIR  +  Y+
Sbjct: 564 NIGWDTKNSASRKSENVNYQRRPLIMPHEITQSMRKDEQIIIVQGHSPIRCGRAIYF 620