Pairwise Alignments

Query, 541 a.a., 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type from Variovorax sp. SCN45

Subject, 566 a.a., long-chain-fatty-acid--CoA ligase FadD from Vibrio cholerae E7946 ATCC 55056

 Score =  164 bits (414), Expect = 1e-44
 Identities = 142/531 (26%), Positives = 244/531 (45%), Gaps = 42/531 (7%)

Query: 36  TWGQVEINARRLSSALAK-LGVQSGERCATIAWNNRRHLEIYYGVSGAGMVCHTVNPRLS 94
           T+ ++E  +R  ++ L   L ++ G+R A +  N  ++    +GV  AGM+   VNP  +
Sbjct: 50  TFRKLEERSRAFAAYLQNDLKLKKGDRVALMMPNLLQYPVALFGVLRAGMIAVNVNPLYT 109

Query: 95  AETLIYIVNHADDQVLFIDRTFLPIVAKLRSALSTVKHVIL--MGPRDEEASGMLDG--L 150
              L + +N AD + + I   F   + ++  A + VKHV+L  +G     A G +    +
Sbjct: 110 PRELEHQLNDADARAIVIVSNFANTLEQI-VANTQVKHVVLTSLGQMLPRAKGTIVDFVV 168

Query: 151 RFYDEVVASGDA----------------DYPWPSIDEDLPSSLCYTSGTTGHPKGVLYSH 194
           ++   +V   D                  Y  P +  +  + L YT GTTG  KG + +H
Sbjct: 169 KYVKGMVPKYDLPGAISMRKALHKGRRLQYVKPFMSGEDIAFLQYTGGTTGVAKGAILTH 228

Query: 195 RSTVLHALAGNSPDG-IGVSARDAVMPVVPMFHVNAWGVPYIAAAQ--GAKLVLPGPNLD 251
           R+ V + L      G +    R+ V+  +P++HV A  V  +   +  G  L++  P  D
Sbjct: 229 RNMVANVLQAKGAYGPVLQEGRELVVTALPLYHVFALTVNCLLFIEMGGRNLLITNPR-D 287

Query: 252 GPSLATLIDDEEVGLALGVPTIWMGLLAALRARGTKPKSLKRTIVGGAALPPSMFAAFRD 311
            P     +         GV T++  L+          K++K  + GG A+  ++   ++ 
Sbjct: 288 IPGFVKELQKYPFTAITGVNTLFNALVNNEDFHELDFKNMKLAVGGGMAVQRAVAERWKK 347

Query: 312 EFGVELIHAWGMTETSPLGTLNQPLARHIHLDPQRQSEVRLGQGRPPYGVQLRVVDDGGA 371
             GV L+  +G+TE SPL T N          P   ++     G P    ++R+VDD G 
Sbjct: 348 TTGVHLLEGYGLTECSPLVTGN----------PYDLTDYTGAIGLPVPSTEVRIVDDAGN 397

Query: 372 VLPNDGKSPGKLQIRGHWIVSSYFG---AESSALTSDGWFDTGDIATLDANGYMVIRDRA 428
           V+PND    G+LQ+RG  ++  Y+    A    L ++GW  TGDI   D  G + I DR 
Sbjct: 398 VVPND--QVGELQVRGPQVMQGYWQRPEATKEVLNAEGWLSTGDIVKFDDQGLIHIVDRK 455

Query: 429 KDIIKSGGEWISSVDIENIAIGHPAIANAAAIGVPHPKWDERPVLVAVKKEGANVSEADL 488
           KD+I   G  +   +IE++   H  +   AAIG  +    E   +  VK++  ++++ ++
Sbjct: 456 KDMILVSGFNVYPNEIEDVVALHGKVLEVAAIGQANDVSGELVKIYVVKRD-PSLTKDEV 514

Query: 489 LAFFKGRLPDWQIPDKAVFIDALPLSGTGKVFKNRLREAYGGLLAGSTRES 539
           +A  +  L  +++P    F D LP +  GK+ +  LRE     LA   ++S
Sbjct: 515 IAHCRKHLTGYKVPKLVEFRDDLPKTNVGKILRRVLREENDAQLAAKAKQS 565