Pairwise Alignments

Query, 1107 a.a., Acriflavin resistance protein from Variovorax sp. SCN45

Subject, 1067 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  630 bits (1624), Expect = 0.0
 Identities = 380/1107 (34%), Positives = 618/1107 (55%), Gaps = 69/1107 (6%)

Query: 3    QQRLNFAGFLAKHFITSKLTLVFIIAVALMGVVAVLQTPREENPQIIVPAAAVMVGLPGA 62
            + RL  +G +A  F  S +T +  +   LMG+ AV+ TP+EE PQI V  A V +  PGA
Sbjct: 17   ESRLGISGRIAAAFQNSAMTPLLALVGLLMGLFAVMVTPKEEEPQIDVTFADVYIPFPGA 76

Query: 63   SASEVEALVVTPLEGVLSELSGVDHIESTSRNSQGIVQVQFKVGESKEQSLVKLYDRVMA 122
            S  EVE+LV TP E V+SE+ G+D I S S+    ++   FKVG  +  ++V++Y+++ +
Sbjct: 77   SPREVESLVTTPAEQVISEIEGIDKIYSFSQPDGAMIVAIFKVGVPRNDAVVRIYNKLYS 136

Query: 123  SRAWLPADATT--PLVQSIDADDVPIVTFTLA--SSKYDDYALNRMAERMAERLRSTENV 178
            ++ W+P       P+++    +DVPIVT TLA  S ++D   L ++A  +   L+     
Sbjct: 137  NKDWMPQGVGVGEPIIKPKGIEDVPIVTITLADKSDRFDQQQLTQVAHGLETELKRIPGT 196

Query: 179  SVVSLRGGQHREITIELDPDRLQAYGVTLGQARAAFPASNLTLPLQPTVRDGQVQAIKLV 238
              +   GGQ+  + + LDP ++  +G+TL Q   + PA+N + P+     D Q   +++ 
Sbjct: 197  RDIYTIGGQNTIVDVRLDPAKMNGFGITLDQLNQSLPAANQSSPMLRLTHDNQEFPVQVG 256

Query: 239  AAYTSAEDVRNQLVAVRDKRPVYVRDVATVTDGPPSEPATASRLSFGPGDPRFGTADATD 298
               T  E+V+  +V + +  PVY+ D+ATV+ G      TA++           T D   
Sbjct: 257  QFLTRVEEVKQLVVGLHNGTPVYLEDIATVSFGVN----TATQ--------NVWTGDRDG 304

Query: 299  L-PAVTIAVAKKKGTNAVLVANAVIDRMQRMQASFVPQDIQVVVTRNDGQKADDAVNLLL 357
            + PAVTIAVAKK G NAV VA AV  R+  ++   +PQ I V +TR+ GQ A D  N L+
Sbjct: 305  IHPAVTIAVAKKGGENAVDVAKAVEARLVSLENQLIPQGIDVDITRDYGQTAADKSNTLM 364

Query: 358  EHLAIALVTVGLVLILFLGWREALIVMITVPLIMGITLTANLLGGVTINRVTLFALILAL 417
              LA A   V ++++L +GWRE+++V + + + + ITL A+   G T+NRV+LFALI ++
Sbjct: 365  GKLAFATTAVVILVLLTMGWRESIVVGMAIIVTLMITLFASWAWGFTLNRVSLFALIFSI 424

Query: 418  GLLVDAAIVVIENIHRHYASRKPKADKQAETVLATNEIGNATNLATFAVMLVFITLLLAL 477
            G+LVD AIVV+ENIHRH A  K K  +      A +E+G  T LAT  V+   + +   +
Sbjct: 425  GILVDDAIVVVENIHRHMAMGKRKLSELIPP--AVDEVGGPTILATLTVIAALLPMAF-V 481

Query: 478  TGMPRQYFFPIAVTVPVAMAASIVVAYIVVPWASNRWLHRHEVLREESSWPETEHGQLVH 537
            +G+   Y  PI +   + M  S+ VA+++ PW + ++L          +    E G+  +
Sbjct: 482  SGLMGPYMSPIPINASMGMLISLAVAFVLSPWLAGKFL---------KAGHHQEEGKAAN 532

Query: 538  GHGTPGRIERLYLRLFGPL----QQRRNVRIGFALAVLLLMAVSLMQGGWQFVRPAGVGG 593
            G         ++ ++  P     +Q RN R+   L +L L+A S++   +Q         
Sbjct: 533  G---------IFHKIMSPFVTAPKQGRN-RLFLLLTILALIAGSVLLPVFQ--------- 573

Query: 594  AVSALGVPIGFLPKDDQNTFNVVVSMPETTPVEDTDRLVRQVTAVLAREPHVLNYQTWVG 653
                  V +  LP D+++ F +V+ MPE + +E T R++ ++ A L   P V +YQ + G
Sbjct: 574  -----AVVLKMLPFDNKSEFQIVLDMPEGSSLEKTQRVLFEMGATLNDVPEVRDYQIYAG 628

Query: 654  QAGVADFSGLFKGTAARAGSHVAEIRVNLTDKRHRKESSIDVVRELRPRVEAVRAAWPGA 713
             A   +F+GL +    R  +H  +I+VNL  ++ R   S  +  +LRP++  +   + G 
Sbjct: 629  TAAPINFNGLVRHYFMRNQAHQGDIQVNLLGRKERDRDSHTIASQLRPQLNEIAQRF-GG 687

Query: 714  EVALVEQPPGPPLRSTVLAEVYGPDAEGLRTLSAQVREAFAQTYDTVDITDTEPEEVREH 773
            +V +VE PPGPP+ S +LAEVYGP  E     + +VRE F +T D VD+    PE   + 
Sbjct: 688  KVKVVEVPPGPPVWSPILAEVYGPTQEIRNEAARKVREIFRETKDIVDVDMYLPERHEKW 747

Query: 774  RIVPDKDKAALSGVSTAQIAEALALVYGGTTLGRAHVPDEKLPVSVRAFVPRRFEVDPAR 833
            ++V D+ KAA   V  A I +ALA   GG  +   H    K P+ ++       +V   +
Sbjct: 748  QVVIDRSKAAHLQVPYASIVDALATAVGGKPITYLHSEHSKYPIPIQIQATETAKVRLEQ 807

Query: 834  LDRVFVDNAAGRPVPLAELVKVVPASVDRPILHRDNEKVTFVGAELSDSV--PLYAVLDL 891
            +  + V +  G   PL++LV+V    +D  I+H++   +  V  ++S  +  PLY + ++
Sbjct: 808  VLNMKVGSPNGHAYPLSDLVEVRQTRMDDYIVHKNLVPMVMVVGDMSGELDSPLYGMFEI 867

Query: 892  QRRLHGITAPDGRPLRTGNLRFKEDVPDTIDGYQLLWGGEMRMTLDVYRDLSLSLGGALL 951
               L           + G  ++    PD + G  + W GE  +T + +RD+ ++    ++
Sbjct: 868  GFALDE---------QMGLAQYYIHQPDGLSGVAVAWDGEWTVTYETFRDMGIAYAVGMV 918

Query: 952  IIYFALVAYYRSFIVPLVAMSAVPLGIIGIFPGHWLVGVDFSATSMVGIIALAGVVIRNS 1011
            +IY  +VA ++S++VPL+ M+ +PL IIG+ PGH L+G  F+ATSM+G+IALAG+++RNS
Sbjct: 919  LIYLLVVAQFKSYLVPLIIMAPIPLTIIGVMPGHALLGAQFTATSMIGMIALAGIIVRNS 978

Query: 1012 LLIIDFIQDNIRRGMPLREAVREAGAVRLRPILLTMLAIIFGSAVMVTDPVFGGLAVSLI 1071
            +L++DFI   + +GM   EAV ++ AVR +PI+LT LA + G+  ++ DP+F GLA+SLI
Sbjct: 979  ILLVDFINQQVEQGMAFSEAVIQSAAVRAKPIMLTALAAMIGAVFILDDPIFNGLAISLI 1038

Query: 1072 FGTLVSTALTVFVVPLLYELHAKRHTA 1098
            FG  VST LT+ V+P+LY +  ++  A
Sbjct: 1039 FGIFVSTVLTLLVIPVLYYVVMRKRFA 1065