Pairwise Alignments

Query, 285 a.a., Plasmid replication initiator protein from Variovorax sp. SCN45

Subject, 341 a.a., replication initiation protein from Phaeobacter inhibens DSM 17395

 Score =  125 bits (315), Expect = 1e-33
 Identities = 87/251 (34%), Positives = 128/251 (50%), Gaps = 6/251 (2%)

Query: 20  DLFRALPGDMAPRDSQDLMAFPFFSLAKSRRTAPIDFRSGNITIRVEGTAEHGIATIWDA 79
           D F     D  P++    M  P FSL        +++      I V  + + G+ATI D 
Sbjct: 23  DFFLCDVFDAIPKNDLASMEHPLFSLGTRPDRRILNYEHNGAEITVVPSVK-GLATIHDK 81

Query: 80  DVLIWAASQIVEARDAGIRPSRWIRATPYEILRFIGRSTSLNDYQRLKAALDRLQSTSIA 139
           D+LI+  SQ++ A +AG + SR +  T +++L    R TS + Y+RL+ A +RL  T I 
Sbjct: 82  DILIFCISQLMAAVNAGRQVSRTLHLTAHDLLVATNRETSGDAYRRLREAFERLAGTRIT 141

Query: 140 TSIRETTGRRLHRFSWINEWRELADA-SGTPLGIELILPDWFYAGVLDAALVLTIDPAYF 198
           T+I          F  I  W  +  A  G  + + + L +W Y  VL  + VLT+   YF
Sbjct: 142 TNIVTGGQEVTSGFGLIESWEIVRKARGGRMVNVVVTLSEWIYRAVLSKS-VLTLSRDYF 200

Query: 199 RLKGGIERWLYRLVRKHGGRQEHGWQFDFKHLHRKSGSAARFSDFAYDLRALVARQSLPG 258
           RL+  +ER +Y L RKH GRQ+  WQ   + L +KSGSA+    F   LR ++A Q LP 
Sbjct: 201 RLRKPLERRIYELARKHCGRQD-SWQISVEVLLKKSGSASPRRVFRKMLRDMIAAQPLPD 259

Query: 259 YVLGIERMPDD 269
           Y +  E +P D
Sbjct: 260 YAM--EELPGD 268