Pairwise Alignments

Query, 662 a.a., Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) from Variovorax sp. SCN45

Subject, 618 a.a., peptidoglycan glycosyltransferase (RefSeq) from Shewanella sp. ANA-3

 Score =  440 bits (1132), Expect = e-128
 Identities = 245/608 (40%), Positives = 364/608 (59%), Gaps = 14/608 (2%)

Query: 8   AAELSRFRRRVVVVGCVVLFGFGLIGARLAFLQVVRHEELADRAESNRTAIVPIVPNRGQ 67
           AAE S F+RR +     V+    ++   L  LQV  +++ A R+  NR  +VPI P+RG 
Sbjct: 13  AAEASLFKRRALFTFFCVVALLSVLVTNLYHLQVESYKDYATRSNDNRIRVVPIAPSRGL 72

Query: 68  ILDRNGVVLASNYAAYTLEITPSKVGDLNAALDELDAIVEITPNDRRRFKRLREDSRSFD 127
           I DRNGV+LA N   Y+L++ P K+ +++  LDEL  ++EITP++R  F    +  R F 
Sbjct: 73  IYDRNGVLLAENQPFYSLDLVPEKIANMSETLDELGKLIEITPDERETFTDALKFHRRFK 132

Query: 128 SIPIRTRLSDEEVARFAAQRYRFPGIEIKARLFRSYPHGEVASHVIGYIGRINQREKTAM 187
            + ++ +L++E+VA F+  ++RFPGI ++A L R+YP+    +HV+GY+G+IN R++  +
Sbjct: 133 PLTLKNQLTEEQVAIFSVNQHRFPGISVEAGLKRNYPYASQLTHVLGYVGKINTRDRAQL 192

Query: 188 EDWDEEEQANYRGTDYIGKLGIEQSYEKTLHGQTGVEQMETSAGGRAVRRLARHPATPGN 247
           E  D+ +  NY  T  IGK GIE+ YE  LHG  G  + E +  GR +R L   P  PG 
Sbjct: 193 ERNDQWK--NYAATKDIGKQGIEKFYESLLHGTPGHLEEEVNNRGRTIRTLKIVPPEPGQ 250

Query: 248 TVMLSLDIKLQKLVEDMFGERRGALVAIDPKTGEILAFVSKPTFDPNLFVEGIDHESWAA 307
            + L+LD++LQ+   ++    RG++VAIDP+ G ILA VS P++DPN FV+GI+ + ++ 
Sbjct: 251 DIYLTLDLQLQQKAVELLQGHRGSIVAIDPRDGGILALVSSPSYDPNQFVQGINSKDYSD 310

Query: 308 LIESIDKPLLNRALRGTYPPGSTYKPFMALAALETGARAADKIENDPGSYSFGG--RTFL 365
           L+    +PL+NRA +G Y P ST KP +AL  L+  A        DPG +   G  R + 
Sbjct: 311 LLNDKSRPLINRATQGQYAPASTVKPIIALLGLDEKAVTEHTRIWDPGFWQIPGVERKYR 370

Query: 366 S-HRGGLGGVDMHRAIQFSSNTYFYSLANEMGVDLIHEFMAPLGFGQFTGIDLLGESRGV 424
              R G G V+++ AI  S +TYFY LA ++GVD I  FM   GFGQ TG+D+  ES G 
Sbjct: 371 DWKRWGHGWVNVYSAIVESCDTYFYELAYKIGVDPIARFMEQFGFGQNTGVDIFEESAGN 430

Query: 425 LPSKAWKRAAYRRPDMKTWHAGETISLGIGQGYNSFTMLQLASANATLANGGMHYRPHLV 484
           +PSK WKR  Y     + W+ G+TIS+GIGQGY + T LQLASA A LAN G  + PHL+
Sbjct: 431 MPSKEWKRLKYN----QAWYIGDTISVGIGQGYWTATPLQLASATAILANDGRRFPPHLL 486

Query: 485 RAIKDTVTEEIVAQVQPQARDLGYAQKHVDVVRNAMVAVTKGGTGTRVFAGAAYTSAGKT 544
           ++IKD  T +I + +           ++  ++  AM            F  A+YT+A KT
Sbjct: 487 KSIKDN-TAKIDSPINELPPIELKNPRNWKIINEAMRQTAHKSR----FTDASYTAAMKT 541

Query: 545 GTAQAVSLGPKARASGKALEERQRDHALYMAFAPAEAPTIAVAAIVENAGFGAAHAAPIV 604
           GTAQ + +    +     + E  RD+AL +A+AP E P I +A ++ENAG+G A+A P+ 
Sbjct: 542 GTAQVIGVAENTKYDANKIAEHFRDNALVVAYAPFEDPKIVLAVVMENAGWGGANAGPVA 601

Query: 605 RRVFDYWI 612
           R + D ++
Sbjct: 602 RAMLDEYM 609