Pairwise Alignments

Query, 668 a.a., 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) from Variovorax sp. SCN45

Subject, 868 a.a., Fe/S-dependent 2-methylisocitrate dehydratase AcnD from Vibrio cholerae E7946 ATCC 55056

 Score =  111 bits (278), Expect = 1e-28
 Identities = 105/346 (30%), Positives = 150/346 (43%), Gaps = 44/346 (12%)

Query: 344 VGTDSHTPHSGALGCVAFGVGTTDMANAFVTGAVRMTVPPSLRIVLDGALPPGVTAKDIA 403
           VGTDSHTPH  ALG +A GVG  +     +     M +P  + + L GA  PG+TA DI 
Sbjct: 201 VGTDSHTPHVDALGVLAIGVGGLEAETVMLGRPSMMRLPDIVGVKLTGARQPGITATDIV 260

Query: 404 LNLLARPAIRAGSGVGKVFEFTGPVVEKLSTDERATLTNMTAELGGFTGIVAPDAETVRF 463
           L L     +R    V    EF G   + L+  +RAT++NMT E G   G+   D +T+++
Sbjct: 261 LAL--TEFLRRERVVSAYLEFFGEGAKALTIGDRATISNMTPEYGATAGMFYIDEQTIQY 318

Query: 464 L----RERRGVEFVLED------WMRSDPDAVYAETIHLDCSTVGAMVASPGDPGNGLPL 513
           L    RE   V  V         W  S   A Y   +  D S+V   +A P +P   LP 
Sbjct: 319 LKLTGREPEQVALVESYAKAAGLWADSLEHAEYERVLEFDLSSVERNLAGPSNPHRRLPT 378

Query: 514 -----------SQVKESVRID---------IAYGGSCT-AGKREDFDHYHEVLRWAADRG 552
                      +Q +E+ + +         IA   SCT      +      + + A   G
Sbjct: 379 KDLSARGIAIPAQQREAQQAEGLMPDGAVIIAAITSCTNTSNPRNVVAAGLLAKKANQLG 438

Query: 553 MRVAPGVELFLQFGTTAVRDQCVAAGYLDAFERVGARILQPSCGAC-GNCGPGGSARAEQ 611
           ++  P V+     G+   +     AG L   E++G  I+  +C  C G  G    A  ++
Sbjct: 439 LKRQPWVKTSFAPGSKVAKLYLQEAGLLSELEQLGFGIVAYACTTCNGMSGALDPAIQQE 498

Query: 612 V--------TVSAINRNFPGRGGP--GSVWLASPPTVAASAIAGEL 647
           +         V + NRNF GR  P     +LASPP V A AIAG +
Sbjct: 499 IIERDLYATAVLSGNRNFDGRIHPYAKQAFLASPPLVVAYAIAGTM 544



 Score = 50.4 bits (119), Expect = 3e-10
 Identities = 22/48 (45%), Positives = 34/48 (70%)

Query: 91  VVVAGKRYGKGSSREHSPAAEKLAGIRLIIAESFERIYRQNADNIGLI 138
           +V+AG  YG+GSSR+ +    +LAG+  I+AE FERI+R N   +G++
Sbjct: 743 IVIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNLVGMGVL 790