Pairwise Alignments

Query, 668 a.a., 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) from Variovorax sp. SCN45

Subject, 418 a.a., homoaconitase large subunit from Methanococcus maripaludis S2

 Score =  138 bits (348), Expect = 4e-37
 Identities = 109/331 (32%), Positives = 155/331 (46%), Gaps = 24/331 (7%)

Query: 326 GISHAMMTEH-YALPGQLVVGTDSHTPHSGALGCVAFGVGTTDMANAFVTGAVRMTVPPS 384
           GI H ++ E  +  P  ++ G DSHT   GA G  A G G TDM   + TG   + VP +
Sbjct: 96  GICHQVLPEKGHVKPNMIIAGADSHTCTHGAFGAFATGFGATDMGYVYATGKTWLRVPET 155

Query: 385 LRIVLDGALPPGVTAKDIALNLLARPAIRAGSGVGKVFEFTGPVVEKLSTDERATLTNMT 444
           +R+ + G     ++ KDI L        R  + +    E+ G  V  LS DER  L+NM 
Sbjct: 156 IRVNVTGE-NENISGKDIILKTCKEVGRRGATYMS--LEYGGNAVHNLSMDERMVLSNMA 212

Query: 445 AELGGFTGIVAPDAETVRFLRERRGV--EFVLE----DWMRSDPDAVYAETIHLDCSTVG 498
            E+GG  GI+  D  T R+L E  GV  E +LE         + +  Y +TI  D + + 
Sbjct: 213 IEMGGKAGIIEADDTTYRYL-ENAGVSREEILELKKNKITVDESEEDYYKTIEFDITGME 271

Query: 499 AMVASPGDPGNGLPLSQVKESVRIDIAYGGSCTAGKREDFDHYHEVLRWAAD--RGMRVA 556
             VA P  P N   +S+V E   ++  + GSCT G+  D       LR AA   +G +V 
Sbjct: 272 EQVACPHHPDNVKGVSEV-EGTELNQVFIGSCTNGRLND-------LRIAAKYLKGKKVN 323

Query: 557 PGVELFLQFGTTAVRDQCVAAGYLDAFERVGARILQPSCGACGNCGPGGSARAEQVTVSA 616
               L +   + ++  + +  G +D F   GA I  P CG C     G     E V ++ 
Sbjct: 324 ENTRLIVIPASKSIFKEALNEGLIDIFVDSGALICTPGCGPCLGAHQGVLGDGE-VCLAT 382

Query: 617 INRNFPGRGG--PGSVWLASPPTVAASAIAG 645
            NRNF GR G     V+L+SP   A SA+ G
Sbjct: 383 TNRNFKGRMGNTNAQVYLSSPKIAAKSAVKG 413