Pairwise Alignments

Query, 390 a.a., Alpha-methylacyl-CoA racemase (EC 5.1.99.4) from Variovorax sp. SCN45

Subject, 394 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  141 bits (356), Expect = 3e-38
 Identities = 123/392 (31%), Positives = 177/392 (45%), Gaps = 28/392 (7%)

Query: 1   MPGPLSGIRVLELPAIGPAPFCGALLADMGADVVRIDRASASAIDIGTPVPP-------- 52
           M  PL GIRVLEL  I   P+ G  LAD+GADV++++  S +  D  T  PP        
Sbjct: 1   MEAPLKGIRVLELARILAGPWIGQTLADLGADVIKVE--SPAGDDTRTWGPPFVTGEDDE 58

Query: 53  -----RFDFYNRNKRSVALDLKSRGAVDAALQLVRRADILIEGFRPGVAERLGLGPDECL 107
                 F   NR KRSV LD  +    +A  +L  ++D+L+E F+ G   + GL  +   
Sbjct: 59  RLDAAYFHACNRGKRSVVLDFTTAEGQEAVRRLAAQSDVLLENFKVGGLAKYGLDYESLS 118

Query: 108 GANPRLVYGRMTGWGQDGPLAQAVGHDINYLALSGALHCIGEKGRPPVPPLNLAADLGGG 167
             NPRL+Y  +TG+GQDGP A   G+D     +SG +   GE  R P       AD+  G
Sbjct: 119 KVNPRLIYCSVTGFGQDGPYAHRAGYDYIVQGMSGIMDLTGEPDREPQKIGVAFADIFTG 178

Query: 168 AMYLAVGVLAALSEARSSGRGQVVDAAMVDGLANLMSAFSAFRQMGDWTAERGENIVDGG 227
            +Y  + V AAL++   +G GQ +D A++D +  +++  +    +      R  N     
Sbjct: 179 -LYGVIAVQAALAQRERTGEGQQIDMALLDCMTGVLANQALNFLVSGKAPRRLGNAHPNI 237

Query: 228 APFYGTYETRDGKYVAVGAIEARFYR--ALLAGIGLDA-AQLPPQNDRASW-PAVRQRFA 283
           AP Y  + T DG  +     + +F +   LL    L A A+     DR     ++    A
Sbjct: 238 AP-YQVFPTSDGHLIVAVGNDRQFVKFCELLGRPDLAADARYRTNADRVQHRDSLTPELA 296

Query: 284 EVFIARTRD---EWVEAMRGRDACLSPVLDLDEAPQDVHMQARAVFTRFDGVVHPSPAP- 339
                  RD   E +EA       ++ V D+   PQ VH Q R            SP   
Sbjct: 297 AETAKYERDTLLEKLEASGVPGGPINTVADVFADPQIVHRQMRVDTPHTGAAAGTSPGVR 356

Query: 340 ---RFARTPSALQRPAPAPGAQSSEVLAEWGV 368
              RF+    AL R  P  G  ++EVLAE G+
Sbjct: 357 TPIRFSGATLALDRGVPRLGEHTAEVLAEIGM 388