Pairwise Alignments

Query, 390 a.a., Alpha-methylacyl-CoA racemase (EC 5.1.99.4) from Variovorax sp. SCN45

Subject, 372 a.a., L-carnitine dehydratase/bile acid-inducible protein F (NCBI) from Rhodospirillum rubrum S1H

 Score =  170 bits (430), Expect = 7e-47
 Identities = 129/371 (34%), Positives = 180/371 (48%), Gaps = 18/371 (4%)

Query: 5   LSGIRVLELPAIGPAPFCGALLADMGADVVRIDRASASAIDIGTP-----VPPRFDFYNR 59
           L  +RV+++    P PF   LL+D+GA+V++I+      + +  P     V P +   NR
Sbjct: 6   LKDMRVIDMGQYIPGPFACLLLSDLGAEVIKIEPPGGDPMRLFGPLDPDGVSPLYKVLNR 65

Query: 60  NKRSVALDLKSRGAVDAALQLVRRADILIEGFRPGVAERLGLGPDECLGANPRLVYGRMT 119
           NK  V LDLKS         L+ R+  L+E FRPGV ERLG G     G N  LV+  ++
Sbjct: 66  NKTVVTLDLKSAEGKAGLATLIGRSHGLVESFRPGVMERLGFGEAALDGLNRALVHVMVS 125

Query: 120 GWGQDGPLAQAVGHDINYLALSGALHCIGEKGRP--PVPPLNLAADLGGGAMYLAVGVLA 177
           G+GQ GP     GHD+ YLALSGAL   G   +P  P PPL   AD   GAM   V +LA
Sbjct: 126 GFGQTGPWRDRAGHDMTYLALSGALAMSGTADQPVAPFPPL---AD-HAGAMMAVVAMLA 181

Query: 178 ALSEARSSGRGQVVDAAMVDGLANLMSAFSAFRQMGDWTAERGENIVDGGAPFYGTYETR 237
            L     SGRG   D ++ +    L +   A    G  TA RG ++++GGA +Y  Y T 
Sbjct: 182 GLLRRLRSGRGGHYDLSLYESARALNAMGLALAARGAPTA-RGHDLLNGGAAYYKIYGTA 240

Query: 238 DGKYVAVGAIEARFYRALLAGIGLDAAQL-PPQNDRASWPAVRQRFAEVFIARTRDEWVE 296
           DG ++AV  IE +F+ A  A   LD   L   Q++     A+      +F  R R  W+ 
Sbjct: 241 DGGHLAVAPIEPKFWAAFCA--ALDRPDLVARQSEPLPQTALIAELEALFATRDRQAWMA 298

Query: 297 AMRGRDACLSPVLDLDEAPQDVHMQARA-VFTRFDGVVHPSPAPRFARTPSALQRPAPAP 355
            +   D C+ PV   DE    V    R  V +  DG++        A + +A ++P    
Sbjct: 299 VLGPADCCVEPVCRPDEVLAGVLEAPRGMVHSGTDGLIDLLLPILLAESGAAPRQPLRE- 357

Query: 356 GAQSSEVLAEW 366
            A   E +A W
Sbjct: 358 -ATIDEAIALW 367