Pairwise Alignments

Query, 390 a.a., Alpha-methylacyl-CoA racemase (EC 5.1.99.4) from Variovorax sp. SCN45

Subject, 366 a.a., alpha-methylacyl-CoA racemase from Phaeobacter inhibens DSM 17395

 Score =  294 bits (753), Expect = 2e-84
 Identities = 163/367 (44%), Positives = 217/367 (59%), Gaps = 14/367 (3%)

Query: 5   LSGIRVLELPAIGPAPFCGALLADMGADVVRIDRASASAIDIGTPVPPRFDFYNRNKRSV 64
           L GIRV+E+  +GPAPF   +LAD+GADV+ + R   +     T + P     +R KRS+
Sbjct: 2   LQGIRVIEIEGLGPAPFAAMMLADLGADVICVHRKGDN-----TGLMPPHPIIDRGKRSI 56

Query: 65  ALDLKSRGAVDAALQLVRRADILIEGFRPGVAERLGLGPDECLGANPRLVYGRMTGWGQD 124
            LDLKS   V+  LQLV  AD+LIEGFRPGV ERLGLGP  C   NP L+YGRMTGWGQD
Sbjct: 57  TLDLKSDADVETLLQLVESADVLIEGFRPGVMERLGLGPAACHARNPGLIYGRMTGWGQD 116

Query: 125 GPLAQAVGHDINYLALSGALHCIGEKGRPPVPPLNLAADLGGGAMYLAVGVLAAL----S 180
            PLAQ  GHD+NY ALSGAL      G PP PP  L  D+GGGA+YL  G+LAAL    +
Sbjct: 117 SPLAQTAGHDLNYTALSGALWYDATPGTPPQPPATLLGDIGGGALYLVAGILAALVRRGN 176

Query: 181 EARSSGRGQVVDAAMVDGLANLMSAFSAFRQMGDWTAERGENIVDGGAPFYG-TYETRDG 239
              SS  G VVDAA+ DG A++M+     +Q G +   RG +++DG  P +   Y   DG
Sbjct: 177 AHDSSPAGCVVDAAIYDGSAHMMNLLMTLQQAGQFATMRGASLLDG--PHWSRCYLCADG 234

Query: 240 KYVAVGAIEARFYRALLAGIGL-DAAQLPPQNDRASWPAVRQRFAEVFIARTRDEWVEAM 298
            +++V  +E +FY   L+ + L + AQ   Q+D+  WP +  R   VF  + RD W +  
Sbjct: 235 GHISVQCLEPQFYAEFLSRLDLGEDAQFAQQHDKGLWPVLAARLTGVFATQPRDYWADLF 294

Query: 299 RGRDACLSPVLDLDEAPQDVHMQARAVFTRFDGVVHPSPAPRFARTPSALQRPAPAPGAQ 358
            G DAC++PVL  +EA     M  R  +   D  +  +PAPRF+        PAP  G  
Sbjct: 295 DGSDACVAPVLSPEEAVTH-PMNTRRTWIMADNGLQAAPAPRFSGQGDWTAPPAPERGEH 353

Query: 359 SSEVLAE 365
           ++++LA+
Sbjct: 354 TAQILAD 360