Pairwise Alignments

Query, 382 a.a., Alpha-methylacyl-CoA racemase (EC 5.1.99.4) from Variovorax sp. SCN45

Subject, 356 a.a., membrane-anchored racemase from Sinorhizobium meliloti 1021

 Score =  140 bits (354), Expect = 4e-38
 Identities = 105/302 (34%), Positives = 156/302 (51%), Gaps = 30/302 (9%)

Query: 3   PLQGIKVVEMAGLAPGPFAAMMLADMGAQVLRIERP--GQVSPPGHPRLALLD------- 53
           PL G+ VV+M+    GP+ ++ L D+GA+V++IERP  G +S     RL L D       
Sbjct: 8   PLSGLVVVDMSQFLSGPYCSLRLMDLGARVIKIERPDGGDLSR----RLYLSDTEIGGDS 63

Query: 54  -------RSRSAVALDLKSAAGLATLRRLLNGADAFIEGFRPGVMERLGLGPEPCLAANP 106
                  R++ ++A+DLK+ A LA L+RLL  AD  I+ FRPGV+ERLGL  E   A NP
Sbjct: 64  TIFHAINRAKESLAIDLKNEADLAALKRLLAQADVMIQNFRPGVIERLGLDYEAVRAINP 123

Query: 107 KLVYGRMTGWGQSGPLAKAAGHDINYIALTGALHSIGRQGAPPAVPLNL-VGDFGGGGMY 165
           ++VY  ++G+G+ GP  K  G D+   + +G +   G +G  P VP  L +GD   G   
Sbjct: 124 RIVYASISGYGEEGPWVKRPGQDLLAQSRSGVMWLNGDEGQGP-VPFGLAIGDMLAGAA- 181

Query: 166 LAFGIVCALLEVRQSGQGQVVDAAMVDGAASLMTYMYASHA--AGAWSDVRGENVLDGDT 223
            A GI+ AL+    SG G +V+ ++++        +  +H    G               
Sbjct: 182 AAQGILAALVRRGISGNGSLVETSLLEALVDFQFEVLTTHLNDGGRLPKRSAFRSAHAYL 241

Query: 224 APWYGVYETADGQYVSIASAEPQFYAELLRITGLAGGDLPDQLDRASWPVFRLRLAEIFR 283
           A  YGVY  +DG Y++IA       A+LL I  LA    P + D +SW   R R+  +  
Sbjct: 242 AAPYGVYAASDG-YLAIAMTPIPKLADLLEIDELA----PYRDDPSSWFTERDRIKALIA 296

Query: 284 SR 285
           +R
Sbjct: 297 AR 298