Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 295 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  182 bits (461), Expect = 1e-50
 Identities = 100/281 (35%), Positives = 163/281 (58%), Gaps = 3/281 (1%)

Query: 11  QLANALALASLLTILASGLALIFGLRDVMNFGHGALFMLGAYLGYTFSGLFN--FWAALV 68
           Q+   L   S   +L+ GLALIFGL +++NF HGA +MLGA++ +    +    +W AL+
Sbjct: 15  QVLIGLINGSFYAVLSLGLALIFGLLNIINFTHGAFYMLGAFVSWWLLRILGIGYWPALI 74

Query: 69  IVPLLLALLGVLFEYAAIRPLQRRSHMDVALVTFGLALILSQVVIKVWGTAPLSVSAPPS 128
           + PL + L G++ E   ++PL +  H+   L+TFGLALIL   + + +G + L  + PPS
Sbjct: 75  LAPLAVGLFGIVLERLLLKPLYKLDHLYGLLLTFGLALILEGALRQGYGVSGLPYAIPPS 134

Query: 129 LAGSLDLFGHAYPAYRIFLIAMGFGTCVLLAAWLKWTRSGMHVRAVSQQPMVARMMGVNT 188
           L G+ +L     P YR +++      C+++   ++ TR+G  +RA ++ P + +  G+N 
Sbjct: 135 LQGAWNLGFMFLPVYRGWVVLASAVVCLVVWLLIEKTRAGAVMRAATENPTLVKAFGINV 194

Query: 189 DRLSLLVVCLGTGFAGLAGVLAGPYLSVDPAMGASILISCLIVVVIGGLGSIGGAIAAAV 248
             L      LG   A  AGVLA P  SV+P MG++++I    VVVIGG+GSI GA+    
Sbjct: 195 PLLVTATYGLGAALAAFAGVLAAPIYSVNPLMGSNLIIVVFAVVVIGGMGSILGAVLTGF 254

Query: 249 VFGLIQVIGALISPTLAVMAPYMLLFIVLLWRPQGL-GRGR 288
             G+I+ +  ++ P  +    ++++ +VLL +P GL GR R
Sbjct: 255 ALGVIEGLTKVVYPEASATVVFVIMALVLLVKPAGLFGRTR 295