Pairwise Alignments

Query, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

Subject, 380 a.a., acyl-CoA dehydrogenase from Sinorhizobium meliloti 1021

 Score =  285 bits (728), Expect = 2e-81
 Identities = 169/378 (44%), Positives = 225/378 (59%), Gaps = 8/378 (2%)

Query: 5   TELQAALLDSLQRVVDKEIAPLAQQMDEEEKFPEHLIRIFGDMGLMQARVPEEYGGPGLD 64
           TE+Q  + D  +   D+ I P+A+ +D EE+FP  L      +GL    VPE  GGPG D
Sbjct: 4   TEIQGQVRDMARAFADEVIRPMAESLDREERFPAELYGEMAKLGLFGIGVPEHLGGPGFD 63

Query: 65  LTTTCMAKELVARVSMTGAQLINQNTISFVLPLLHFGTDEQRRKWLPRVAKGGVVSSVAI 124
             T  +  E ++R   + A       +   L + H GT+ Q+R  LP V       +  I
Sbjct: 64  TLTYAVVMEELSRGYASVADQCGLVELISTLLVRH-GTEGQQRM-LPDVLNMSAKVAYCI 121

Query: 125 TEPHAGSDVGAMKTNAVREGDHYVVNGQKCFITMAPLADYITLFAKTG-EVNRRGVDNIS 183
           TEP AG+DV  ++T A R+GD +++NG K +I  AP+AD   + A+T  E   RG+   S
Sbjct: 122 TEPEAGTDVSGIRTTAERDGDGWMLNGGKIWIHNAPVADVGFVLARTDKEAGNRGM---S 178

Query: 184 CFIVDMKSAGITLGGSEKMMGQRGTPHADIFFDNVRVPVENRMGEEGRGFISCMHILDLN 243
            FIVD+ SAG+  G  E  MGQR +    + F +VR+P    +G+EGRGF   M +LD  
Sbjct: 179 IFIVDLNSAGVERGPKEHKMGQRASQVGALTFTDVRLPGGALLGQEGRGFHMMMSVLDKG 238

Query: 244 RPTVAASAVGVAQGAFDIAVAYAKERKAFGKAIGEFQGLQFMLADMHIQIEAARALLYKC 303
           R  +AA AVG+AQ   + AV YA  RK FGKAI +FQG+Q++LADM   IEAAR L++  
Sbjct: 239 RVGIAALAVGIAQAGLEAAVDYAGTRKQFGKAISDFQGVQWLLADMAKDIEAARLLVHSA 298

Query: 304 TRAIDAGQHDRLTEMASMVKCFCTDVAMKVTTDAVQVLGGHGYIRGNHVERMMRDAKVLQ 363
              ID G     T+  S+ KCF  D+A++ T DAVQV GG GYIRG  VER+ RDAK+ Q
Sbjct: 299 ASKIDRGLD--ATKACSIAKCFAGDMAVQRTADAVQVFGGSGYIRGFEVERLYRDAKITQ 356

Query: 364 IYEGTNQIQRMVIARRAL 381
           IYEGTNQIQRM+IAR  L
Sbjct: 357 IYEGTNQIQRMIIARELL 374