Pairwise Alignments

Query, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

Subject, 379 a.a., 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) from Pseudomonas stutzeri RCH2

 Score =  269 bits (687), Expect = 1e-76
 Identities = 156/375 (41%), Positives = 221/375 (58%), Gaps = 8/375 (2%)

Query: 6   EEIAFRDSVRRMAERHVAPIAAEIDENDRFPTELIPVYGDIGLLQLWVPEAYGGPGANLT 65
           ++ A  +  R+ A+  + P A +     R+P E I     +G   + VPE +GG      
Sbjct: 6   DQNAIAEMARQFAQERLKPFAEQWSREHRYPAEAIGEMAALGFFGMLVPEQWGGSDTGYL 65

Query: 66  MVCMAREEISRHSEACG-LLAGETTMFVLPLMHFGTEAQKQRFLPIVAQGRTLTAIALSE 124
              MA EEI+    AC  +++   ++  +P++ FG E QK  FL  +A+G  + A AL+E
Sbjct: 66  AYAMALEEIAAGDGACSTIMSVHNSVGCVPILRFGNEQQKSDFLTPLARGEQIGAFALTE 125

Query: 125 PGAGSDVSAIRTRAVRDGDSYVINGQKQWCSFGSVADYIMVFAKTSDAGGVDNISPFIVD 184
           P AGSD S++RTRA RDGD YV+NG KQ+ + G  A  ++VFA T    G   IS FIV 
Sbjct: 126 PQAGSDASSLRTRARRDGDHYVLNGAKQFITSGKHAGTVIVFAVTDPDAGKGGISAFIVP 185

Query: 185 VKTMPGVSFGKKERKMGMRGAVNVPVYLDNVRVPAENMLGEEGKGFRAAMRALDLNRPAI 244
             + PG    + E K+G   +    +  +++RVP  N LGEEG+G+R A+  L+  R  I
Sbjct: 186 TDS-PGYQVVRVEDKLGQHASDTCQIAFEDLRVPVANRLGEEGEGYRIALANLEGGRIGI 244

Query: 245 AAASVGLAQGALDAAVAYAQQRKQFKRFISEFQGVQFMLADMAMQIQAARCLLYECTRAG 304
           AA +VG+A+ A +AA  YA+ R+ F + I E Q V F LADMA QI  AR +++      
Sbjct: 245 AAQAVGMARAAFEAARDYARDRETFGKPIIEHQAVAFRLADMATQIAVARQMVHHAAALR 304

Query: 305 DRGEWDRLPML--ASMAKCFASDMAMKVTTDAVQVLGGYGYTKDYPVERMMRDAKLNQIF 362
           + G     P L  ASMAK FAS+MA KV + A+Q LGGYGY  D+PVER+ RD ++ QI+
Sbjct: 305 EVGR----PALVEASMAKLFASEMAEKVCSAAIQTLGGYGYLADFPVERIYRDVRVCQIY 360

Query: 363 EGTNQIQRVVIAREL 377
           EGT+ IQR+VI+R L
Sbjct: 361 EGTSDIQRLVISRNL 375