Pairwise Alignments

Query, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

Subject, 380 a.a., acyl-CoA dehydrogenase from Sinorhizobium meliloti 1021

 Score =  295 bits (756), Expect = 1e-84
 Identities = 174/378 (46%), Positives = 228/378 (60%), Gaps = 12/378 (3%)

Query: 11  RDSVRRMAERHVAPIAAEIDENDRFPTELIPVYGDIGLLQLWVPEAYGGPGANLTMVCMA 70
           RD  R  A+  + P+A  +D  +RFP EL      +GL  + VPE  GGPG +     + 
Sbjct: 11  RDMARAFADEVIRPMAESLDREERFPAELYGEMAKLGLFGIGVPEHLGGPGFDTLTYAVV 70

Query: 71  REEISRH----SEACGLLAGETTMFVLPLMHFGTEAQKQRFLPIVAQGRTLTAIALSEPG 126
            EE+SR     ++ CGL+   +T+    L+  GTE Q QR LP V       A  ++EP 
Sbjct: 71  MEELSRGYASVADQCGLVELISTL----LVRHGTEGQ-QRMLPDVLNMSAKVAYCITEPE 125

Query: 127 AGSDVSAIRTRAVRDGDSYVINGQKQWCSFGSVADYIMVFAKTSDAGGVDNISPFIVDVK 186
           AG+DVS IRT A RDGD +++NG K W     VAD   V A+T    G   +S FIVD+ 
Sbjct: 126 AGTDVSGIRTTAERDGDGWMLNGGKIWIHNAPVADVGFVLARTDKEAGNRGMSIFIVDLN 185

Query: 187 TMPGVSFGKKERKMGMRGAVNVPVYLDNVRVPAENMLGEEGKGFRAAMRALDLNRPAIAA 246
           +  GV  G KE KMG R +    +   +VR+P   +LG+EG+GF   M  LD  R  IAA
Sbjct: 186 SA-GVERGPKEHKMGQRASQVGALTFTDVRLPGGALLGQEGRGFHMMMSVLDKGRVGIAA 244

Query: 247 ASVGLAQGALDAAVAYAQQRKQFKRFISEFQGVQFMLADMAMQIQAARCLLYECTRAGDR 306
            +VG+AQ  L+AAV YA  RKQF + IS+FQGVQ++LADMA  I+AAR L++      DR
Sbjct: 245 LAVGIAQAGLEAAVDYAGTRKQFGKAISDFQGVQWLLADMAKDIEAARLLVHSAASKIDR 304

Query: 307 GEWDRLPMLASMAKCFASDMAMKVTTDAVQVLGGYGYTKDYPVERMMRDAKLNQIFEGTN 366
           G         S+AKCFA DMA++ T DAVQV GG GY + + VER+ RDAK+ QI+EGTN
Sbjct: 305 GL--DATKACSIAKCFAGDMAVQRTADAVQVFGGSGYIRGFEVERLYRDAKITQIYEGTN 362

Query: 367 QIQRVVIARELLRNAAAA 384
           QIQR++IARELL+  A A
Sbjct: 363 QIQRMIIARELLKKGARA 380