Pairwise Alignments

Query, 384 a.a., Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.8.1) from Variovorax sp. SCN45

Subject, 389 a.a., acyl-CoA dehydrogenase domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  258 bits (659), Expect = 2e-73
 Identities = 144/372 (38%), Positives = 219/372 (58%), Gaps = 4/372 (1%)

Query: 11  RDSVRRMAERHVAPIAAEIDENDRFPTELIPVYGDIGLLQLWVPEAYGGPGANLTMVCMA 70
           RD+VR  A   +APIAA++D+ + FP EL PV G++GLL + VPE YGG         +A
Sbjct: 20  RDAVRSFAANEIAPIAAKVDQENAFPNELWPVLGEMGLLGVTVPEEYGGADMGYLAHVVA 79

Query: 71  REEISRHSEACGLLAG-ETTMFVLPLMHFGTEAQKQRFLPIVAQGRTLTAIALSEPGAGS 129
            EEISR S + GL  G  + + V  +   G   QK ++LP +  G  + A+A+SEP AGS
Sbjct: 80  MEEISRASASIGLSYGAHSNLCVNQINRNGNAEQKAKYLPKLVSGEHIGALAMSEPNAGS 139

Query: 130 DVSAIRTRAVRDGDSYVINGQKQWCSFGSVADYIMVFAKTSDAGGVDNISPFIVDVKTMP 189
           DV +++  A ++GD Y++NG K W + G  AD  +++AKT    G   I+ FIV+ +   
Sbjct: 140 DVVSMKLSARKEGDRYILNGNKMWITNGPDADTYVIYAKTDMDKGPHGITAFIVE-RGFK 198

Query: 190 GVSFGKKERKMGMRGAVNVPVYLDNVRVPAENMLGEEGKGFRAAMRALDLNRPAIAAASV 249
           G S  +K  K+GMRG+    +  ++  VP EN+LG    G +  M  LD  R  ++   +
Sbjct: 199 GFSQAQKLDKLGMRGSNTCELVFEDCEVPEENILGGLNNGVKVLMSGLDYERVVLSGGPL 258

Query: 250 GLAQGALDAAVAYAQQRKQFKRFISEFQGVQFMLADMAMQIQAARCLLYECTRAGDRGEW 309
           G+    +D  V Y  +R+QF + I +FQ VQ  LADM   + AA+  +Y   ++ DRGE 
Sbjct: 259 GIMTACMDIVVPYIHEREQFGKSIGQFQLVQGKLADMYTGMNAAKSYVYNVAKSCDRGET 318

Query: 310 DRLPMLASMAKCFASDMAMKVTTDAVQVLGGYGYTKDYPVERMMRDAKLNQIFEGTNQIQ 369
            R    A+ A  +++++A K+  DA+Q+LGG GY  +Y   R++RDAKL +I  GT++I+
Sbjct: 319 TRKD--AAGAILYSAELATKMALDAIQLLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIR 376

Query: 370 RVVIARELLRNA 381
           R++I REL   +
Sbjct: 377 RMLIGRELFNES 388