Pairwise Alignments

Query, 301 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 297 a.a., Cyn operon transcriptional activator from Pseudomonas fluorescens FW300-N2E2

 Score =  188 bits (478), Expect = 1e-52
 Identities = 111/292 (38%), Positives = 161/292 (55%), Gaps = 3/292 (1%)

Query: 2   NDRIRELDVFLRVTEETSFSAAARSLDCNPSTVSKLIQRLEDRLRVRLFHRTSRVLKLTR 61
           N R  E+ VF  V +E S SAAAR+L   PS VS++I R E RL  RL  RT+R +  T 
Sbjct: 4   NGRSGEMSVFATVAQEGSLSAAARALGLTPSAVSRIIARTEQRLGTRLLLRTTRAITFTA 63

Query: 62  EGEQFLEGAHRVLDALEEAENGLQNTKTRASGVLRFNSSLLLAQHQLSPVIPEFLERHPH 121
           EGE FL GA R+L  ++E E  + +      G L  +++L   +  + P++  F  R+P+
Sbjct: 64  EGEAFLRGARRILADMDEVEEAIADQGV-PRGRLLVSAALGHGRQAIVPLVAAFSARYPN 122

Query: 122 MRVEFVLTASPIDLFENHIDLSFQSGDIPDSSLVARRIATTRWTLCASPKYLSKAGIPMT 181
           + V+  L    +D+     D++ + G +PDS L ARRI  T   + ASP YL + G P+ 
Sbjct: 123 IVVDLTLGDEVVDILGGQADVAVRFGHLPDSPLTARRIGDTGQVVVASPDYLQRHGTPVE 182

Query: 182 LQDLQQHNCMNFLAGSVRSTWA-LQDGSEPVALNVNGNIGSNSAELLRAYAIAGVGIVRL 240
            +DL +HNC+ F        W  ++DG E  +L V+GNI  +S E L  +A  G GI R+
Sbjct: 183 PEDLLRHNCLRFNFRRAEPNWPFIRDGRE-FSLKVSGNIECSSGEALAQFARVGAGIARI 241

Query: 241 SDVHVAADLAAGRLIRVLEKYQLASEEPIYVVYPSKRNLSPRVRAFLDFLNE 292
            +  V+ DL  G LI +LE +     EPI+ V+     +  RVR F+DFL E
Sbjct: 242 GEFTVSEDLQRGDLIPLLEAWNPGDREPIHAVFVGGSAMPARVRLFVDFLLE 293