Pairwise Alignments

Query, 408 a.a., Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 421 a.a., Urea ABC transporter, substrate binding protein UrtA from Pseudomonas fluorescens FW300-N2E2

 Score = 77.4 bits (189), Expect = 7e-19
 Identities = 90/377 (23%), Positives = 156/377 (41%), Gaps = 27/377 (7%)

Query: 20  LTVPLAMQAQAQAQTATGPIKIGVLTIDAGPFATYASLVEDSSRAAVDMLNAEGGALGRK 79
           L+  +A    A    A   IK+G+L   +G  A   + ++D +   +D +NA+GG  G+K
Sbjct: 12  LSASIAAMGMAWTVQAAETIKVGILHSLSGTMAISETSLKDMALMTIDEINAKGGVNGKK 71

Query: 80  FEVVVQSHAGTPSSAIAAVNRLVQQGGVSFVTGQTPTSHSLAISPKLAALNALMI-DVYS 138
            E VV   A           +L+ Q  V+ V G   +    ++ P    LN L+   V  
Sbjct: 72  LEAVVVDPASNWPLFAEKGRQLLTQDKVAVVFGCWTSVSRKSVLPVFEELNGLLFYPVQY 131

Query: 139 QGDDLMTKACQPNFFRVTTPDSVYAAMLREFV---KKSGAKTWNLISPDYAVGHTFAAKF 195
           +G+++      PN F      +  A    E++   +   AK + L+  DY    T     
Sbjct: 132 EGEEM-----SPNVFYTGAAPNQQAIPAVEYLMSEEGGSAKRYFLLGTDYVYPRTTNKIL 186

Query: 196 SDIVKAQGGTVQ--MSLFAAQGTNDFGSYITQLAK----PADALMVTLYMSDGNSFAKQQ 249
              + ++G   +    ++   G +D+ + +  + K       A++ T+       F K+ 
Sbjct: 187 RSFLHSKGVADKDIEEVYTPFGHSDYQTIVANIKKFSAGGKTAVISTVNGDSNVPFYKEL 246

Query: 250 KQFGLFDKYKTVLGNGFATEFQLAAQGDSVLGVLNGLSYHNTMPGERNAAFVKSYEARFK 309
              GL      V+      E         ++G L   +Y  ++    N  FV+S++A  K
Sbjct: 247 ANQGLKATDVPVVAFSVGEEELRGIDTKPLVGNLAAWNYFESVDNPANKKFVESWKAYAK 306

Query: 310 RKPI------YTDADM---MVALEMLRAAIVKAKSTDVSAVRTALAG--LKAPTVFGEVE 358
            K +       T+  M    V + M   A+ KAKSTDV  VR ALAG    AP+ +  + 
Sbjct: 307 AKNLPGADKAVTNDPMEATYVGIHMWAQAVEKAKSTDVDKVREALAGQTFAAPSGY-TLT 365

Query: 359 MRAADHTLIRQLGVAEV 375
           M   +H L + + + E+
Sbjct: 366 MDKTNHHLHKPVMIGEI 382