Pairwise Alignments

Query, 518 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 550 a.a., AMP-binding enzyme family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  220 bits (560), Expect = 1e-61
 Identities = 165/520 (31%), Positives = 252/520 (48%), Gaps = 37/520 (7%)

Query: 18  IATISGDRQRTWKEVGERVPRMAAALRSLGVRDGAFVAILAMNSDRYLELFFSVPWAGGA 77
           +  +  D ++T++E    V  +A  L +LGV+ G  VA+ A N   ++ L F+    G  
Sbjct: 28  VVYVDRDYRQTYREFVSVVDDLARGLMALGVKRGDKVALWATNVPYWVALQFATAKIGAV 87

Query: 78  LAPLNIRWSAVENVYALTDSNAEVLFVDDSFLDQMDF------------------LRAER 119
           L  +N  +   E  Y L  S  E LF+ D F D  DF                  LR E 
Sbjct: 88  LLTVNTNYRESELRYLLEQSECENLFIMDGFRDH-DFVQTIYQVIPELRMQPRGQLRCEG 146

Query: 120 -PSIRHVIYMGDGPTPAGMLAYEELVAQHAPMPDAD--RKEDDL--YVIF---YTGGTTA 171
            P ++ V+++G      GM +  E+V+    + D +  +++D+L  Y +    YT GTT 
Sbjct: 147 LPHLKRVMFLG-AEKHRGMYSVPEIVSLGVMVSDEEFRQRQDELDPYDVVNMQYTSGTTG 205

Query: 172 HPKGVAMSHRGVYLATCCYLALLPSVEDLTFLYVAGYFHFAGASALWYITLAAGTH-AIL 230
            PKGV ++H G+              E          FH  G        +  G    IL
Sbjct: 206 FPKGVMLTHVGIGNNGYWIGRNQGFTEKDRVCLPVPLFHCFGCVLGVMAAINHGAALVIL 265

Query: 231 PKFEALPVMKAIGQHRVTNAVLVPTMVNMLLSHPDFKQYDLTSLKTCIYGGSPMPEGLML 290
             F  + VM ++ Q + T    VPTM   +L H  F ++D +SL+T I  GS  PE LM 
Sbjct: 266 ENFNPMHVMASVDQEKCTALYGVPTMFLAVLEHKLFDRFDFSSLRTGIMAGSVCPEPLMR 325

Query: 291 RAMKMVPSWGFYQIYGMTETGGFATMLRWRDHIVSGENASRLRSAGQAGFGNEVRVVRIE 350
           R ++ +        YG+TE     T       +V      R+++ G+A  G EVR+V  E
Sbjct: 326 RVIEKMNMREITICYGLTEGSPVMTQT-----LVDDSLERRVQTVGRAMPGIEVRIVDPE 380

Query: 351 -GDDADVGEIGEIIVRSDFLMMGYLNNPEATAACLR-DGWMHTGDAGYLDADGFLYVADR 408
             ++   G  GE++ R   +M GY N PEATA  +  DGW+H+GD G +D  G++ +  R
Sbjct: 381 TNEEVPHGTPGEVVCRGYNVMKGYYNMPEATAKAVDGDGWLHSGDLGIMDEHGYVRITGR 440

Query: 409 VKDMIVSGGENVYSIEPERALFLHPAVREAAVIGIPSEQWGESVHAVVVLKDGASATAEE 468
           +KDMI+ GGEN+Y  E E  L+    V++  V+G+PS ++GE V A ++ K+G     E+
Sbjct: 441 IKDMIIRGGENIYPREIEEFLYGMEGVQDVQVVGVPSRKYGEEVGAFIIPKEGYDLAPED 500

Query: 469 LIAHCRTLIGGYKCPRSIEFRADPLPVTPVGKVRKNVLRD 508
           +  HCR  I  YK PR I F ++  P+T   K++K  LR+
Sbjct: 501 VRDHCRGRISWYKVPRHIAFVSE-FPMTASAKIQKYKLRE 539