Pairwise Alignments

Query, 292 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 300 a.a., high-affinity branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  112 bits (281), Expect = 8e-30
 Identities = 87/309 (28%), Positives = 151/309 (48%), Gaps = 30/309 (9%)

Query: 2   WIDVVVSGLTAGSLYCLVAVGFNILYRPTKVFNFAQGDLVMVGAMASA---LLMTQWHWP 58
           ++  +V+GLT GS+Y ++A+G+ ++Y    + NFA GD+ M+G  A+    LL+T +   
Sbjct: 4   FVQQLVNGLTLGSIYGMIAIGYTMVYGIIGMINFAHGDIFMLGGFAALIVFLLLTTF--- 60

Query: 59  WVPAFAAAAAAVALLALLE-------------ERVAVAPVLRRSASGTGWIITTLAVAMI 105
                A     +ALL ++              ERVA  P+  R +     +IT + ++++
Sbjct: 61  ----IAGVPVVLALLIMMVVGMLTAALWNWTIERVAYRPL--RGSFRLAPLITAIGMSIV 114

Query: 106 MTNIVGKVWGADPIVVPAPAPLSNDMLGLSAVNISSYQAALIVLTIALVAVV-ELLYASL 164
           ++N +    G  P   P P PL + +  L  +++S  Q  ++V+T  L++V   ++  + 
Sbjct: 115 LSNFIQVTQG--PRNKPIP-PLVSSVYDLFGISVSLKQIIIVVITAILLSVFWYIVNRTP 171

Query: 165 WGKATLAVAEDRDAALLRGIDPVAISRWSFALGGAFAALTGALAAPVLSASTGL-GAMLL 223
            G+A  A  +DR  A L G+D       +F +G A AA+ G +            G    
Sbjct: 172 LGRAQRATEQDRKMAALLGVDVDRTISVTFIMGAALAAVAGTMYLMYYGVVVFTDGFAPG 231

Query: 224 LKGFAAAAIGGLGSNRGALLAGYLIGMAEAASALLLSPGYHNAVMLVLVLAVLLAKPGGL 283
           +K F AA +GG+GS  GA+L G LIG+ E+  +   +  Y +     ++  VL+ KP G+
Sbjct: 232 VKAFTAAVLGGIGSLPGAVLGGLLIGLIESLWSAYFTIDYKDVATFSILAIVLIFKPSGI 291

Query: 284 FSSLEARTV 292
               E   V
Sbjct: 292 LGRPEVEKV 300