Pairwise Alignments

Query, 292 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 291 a.a., putative high-affinity branched-chain amino acid transport system permease protein LivH from Phaeobacter inhibens DSM 17395

 Score =  144 bits (362), Expect = 3e-39
 Identities = 96/293 (32%), Positives = 162/293 (55%), Gaps = 8/293 (2%)

Query: 3   IDVVVSGLTAGSLYCLVAVGFNILYRPTKVFNFAQGDLVMVGAMASALLMTQWHWPWVPA 62
           + ++VSGL  G +Y L+A+GF ++Y+ T+  NFAQGD +M+GA  + L +T   +  +P 
Sbjct: 4   VQLLVSGLANGCVYGLIALGFVLIYKATEAVNFAQGDFMMLGAFVT-LGLTNAEYLHLPF 62

Query: 63  FAAAAAAVALLALLEERVAVAPVLRR--SASGTGWIITTLAVAMIMTNIVGKVWGADPIV 120
           + AA  ++A++A L   + +  +LR     + T  +I T+A+  ++    G +WG +P  
Sbjct: 63  WLAAPLSIAIMAGLGYLLDLV-ILRHLFGQNQTAVVILTIALGFVIRFFAGAIWGHEPQT 121

Query: 121 VPAPAPLSNDMLGLSAVNISSYQAALIVLTIALV-AVVELLYASLWGKATLAVAEDRDAA 179
           + +P  L +  + L+ V +     A+I++T+ L  ++ +    +  G A  A ++++ AA
Sbjct: 122 LESPLALGD--VQLAGVVLGLADLAIIIVTVLLTWSLYQFFQRTKLGLAMQAASQNQMAA 179

Query: 180 LLRGIDPVAISRWSFALGGAFAALTGALAAPVLSASTGLGAMLLLKGFAAAAIGGLGSNR 239
              GI    +    + L GA AA+ G L A   +     G +L +K FAAA IGG GS  
Sbjct: 180 YFMGIPVKRVQGLIWGLSGATAAVAGILFASKGAIDPNAG-LLGIKAFAAAVIGGFGSLP 238

Query: 240 GALLAGYLIGMAEAASALLLSPGYHNAVMLVLVLAVLLAKPGGLFSSLEARTV 292
           GAL  G ++G+ E  +A  L+ GY      VL+LAVL+ +P GLFS +  + V
Sbjct: 239 GALAGGLIVGVIEPFAARYLAAGYSQIAPYVLLLAVLVFRPHGLFSQVRTKKV 291