Pairwise Alignments

Query, 618 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 605 a.a., AMP-dependent synthetase and ligase (NCBI) from Rhodospirillum rubrum S1H

 Score =  259 bits (662), Expect = 2e-73
 Identities = 171/591 (28%), Positives = 283/591 (47%), Gaps = 30/591 (5%)

Query: 35  LRQKEYGVWQPISWSAYAQQARWFGLGLLRLGLRPGQAVAVLSENRKEWVFAQLGAALVR 94
           L  K  G + P SW++   Q       ++  GL PG  V + SENR +W  A L      
Sbjct: 34  LWSKSEGGYAPWSWASVHDQVIALANAMIDQGLAPGDRVVLASENRPDWTIADLAILAAG 93

Query: 95  GVTAGVYPTSPAEEIEHLLALSDAPVIVCEDQEQLDKVLSIRDRLPHLHTIVLIDSRGLR 154
            +    Y T    +  H+L   +A + +       ++ L    R      +V++D     
Sbjct: 94  AIPVPAYATHTEADHLHVLDNVEAAMAIVSTPLVAERFLRAAARAKRRPLVVMMD----- 148

Query: 155 RYDRTGMIDFDEVVALGRRFEADEPAAAAAATVGPA-LDDIGLIVFTSGSTGRPKAAMMS 213
            +D   ++     V       A+       A V     DD+  I+ TSG+ G PK  M++
Sbjct: 149 -FDDAVVVPAGLTVLAWNAMMAEGEGRGVPAVVHRIQTDDLASIIHTSGTGGTPKGVMLA 207

Query: 214 WRGLGTAARG---LNSVLGCREGDSLVSYLPLCHMGEQMFSLHIPVAFGAVVNFAESLRT 270
            R +     G   L   +G  E +  +S+LPLCH  E    L  P++ GA V FAE   T
Sbjct: 208 HRSILHNCHGAFKLLETIGLEE-EVFLSFLPLCHSYEHTTGLFFPISLGAQVYFAEGAET 266

Query: 271 VQDDLRELSPRIFFGVPRIWEKFHAAIQNKLREAGGLRLWLYERAMRSLAHDAGVPR--- 327
           +  ++ E  P I   VPR++E   A I   + + GGL+  ++  A+     D G  R   
Sbjct: 267 LAANMVEAKPTIMTAVPRLYEMMRARILRAVEKEGGLKEKMFREAV-----DLGRRRMDD 321

Query: 328 -AQWSWLQRARWAVWYVLILRSLLNYLGLRGCRVAVSAAAPIAPEVLRFFRVLGVPIREA 386
            A      +   A    L+  ++    G R  +  +S   P+ P+V  FFR LG+P+ + 
Sbjct: 322 PASLGVKDKLTDAALDKLVRHAVKARFGGR-LKAMISGGGPLNPDVGYFFRALGIPVLQG 380

Query: 387 YGMTEASGATTMQPGDDSPVGTVGVPYPGVEVQLADDGEILIRGEVVFRGYLKNDEATRE 446
           YG+TE +   +        + TVG    GV++++A DGEIL++G +V  GY  + E+TR 
Sbjct: 381 YGLTETAPVVSCNMPKKVKMNTVGPALYGVDIRIASDGEILVKGPLVMDGYWNDPESTRA 440

Query: 447 AIDAEGWLHTGDIGRWEDSPSKNAPAGRELRIVDRKKDIMITAGGKNITPSEIENAMRFS 506
            +D +GWLHTGD+G  ++           ++I DRKKD+++ +GG NI+P  +E  +   
Sbjct: 441 VLDPDGWLHTGDVGTLDEDGF--------IQITDRKKDLIVNSGGHNISPQRVEGILGLE 492

Query: 507 PFIKEAVAIADRRHFVSALIQIDFETVSKWSEEKGLVYTTFRSLVELPQVRELVQREVDT 566
           P I   V   DR   + ALI  + E +++WS+E G        + E   +R+ + + V+ 
Sbjct: 493 PEIGVGVVFGDRMPHLVALIVPEKEFLARWSKETGKP-ADLALVYEDADLRQAIGKAVER 551

Query: 567 ANARMPQVQQVRKFHLLTKELDHDDGEVTATMKVRRKAVFEKYAQVIEEIY 617
           ANA++  V+++RKF LL + +  ++ ++T +MK RR  + ++Y  +I  +Y
Sbjct: 552 ANAKLGTVEKIRKFALLPEPMSVENDQLTHSMKARRHVLRDRYGALIAGLY 602