Pairwise Alignments

Query, 346 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 373 a.a., inner-membrane translocator (NCBI) from Rhodospirillum rubrum S1H

 Score =  247 bits (630), Expect = 4e-70
 Identities = 139/362 (38%), Positives = 210/362 (58%), Gaps = 21/362 (5%)

Query: 4   GVFHENFASEERLWDSPTSRTWMAAFVLSLF----------------TLPLWGSDYVLAM 47
           G F  ++ ++ +++D+PTSR  M  F+ +L+                 L L+   Y L++
Sbjct: 10  GDFRTSYRADTKIFDTPTSRWAMVGFLCALYGLVILPQAFPPLASLPVLRLFADGYALSL 69

Query: 48  ACIVGIHVIAALGLNLTTGNAGLISLSHGAFIGVGCYTVAWLGKQ-GVPFYIALPVAGFV 106
              V  + IAALGLN+  G  G ISL H AF GVG ++ AWL  + G+P  + +P+AG +
Sbjct: 70  GIQVCYYAIAALGLNILVGFTGQISLGHAAFFGVGAFSSAWLNTRVGLPVLVCIPLAGLM 129

Query: 107 AAFLGVIVGLPSLRVKGLYLAIATLAAHFILSFAFREWDAVTGGVSGTSIPRANLFGFEL 166
           +A  G++ G P+ R+KGLYLAIATLAA FI+   F   D  TGG SG       L  F  
Sbjct: 130 SAAAGLLFGAPAARIKGLYLAIATLAAQFIIEDLFVRMDWFTGGSSGAMADTPMLGSFAF 189

Query: 167 VGDRRNFYLIFVCAFAMAVAARNLARTHIGRAFVAVRDRDISAEILGVHLLRTKLTAFAI 226
             D R F L       + V A NL R+  GRAFVA+RD  +SAE++G+ L R ++ +F I
Sbjct: 190 DNDARYFLLSLSFTIVLFVMAANLMRSRDGRAFVALRDHYLSAEVMGIALTRYRVMSFGI 249

Query: 227 GAFYAGVAGGLLGYFYGSITPDYFVLTLSVFYLAAVIVGGLGTVLGSVLGAVFMTFVPEG 286
            AFYAG+ G L G++   ++ + F + LS+ +L  +I+GGLG+V+G++LG +FM  +PE 
Sbjct: 250 AAFYAGIGGALYGHYLMFVSAEAFTILLSIQFLGMIIIGGLGSVMGAMLGTIFMVALPEV 309

Query: 287 L-RLLASVSSQAF---PGVAGLLLPMGQVVFGLLIIVFLIFEPHGLAAIWARVRRSFHLW 342
           +  ++A++ +  +   P V   L    ++  G  II+FLIFEP GLA  W  ++  + L+
Sbjct: 310 MGAVIAALQTTQWGNRPAVINGLPFFREMAIGAAIILFLIFEPDGLAHRWRLIKTYWKLY 369

Query: 343 PF 344
           PF
Sbjct: 370 PF 371