Pairwise Alignments

Query, 346 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 407 a.a., proline/arginine ABC transporter, permease component (from data) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  174 bits (441), Expect = 4e-48
 Identities = 110/314 (35%), Positives = 161/314 (51%), Gaps = 20/314 (6%)

Query: 26  MAAFVLSLFTLPLWGSDYVLAMACIVGIHVIAALGLNLTTGNAGLISLSHGAFIGVGCYT 85
           + A ++    LP+  S Y   +     ++V+  LGLN+  G +G + L + AF  VG Y 
Sbjct: 93  LLAVLVVFAVLPMLVSTYQTNIMISALLYVMLGLGLNIVVGLSGQLVLGYVAFYAVGAYA 152

Query: 86  VAWLGKQ-GVPFYIALPVAGFVAAFLGVIVGLPSLRVKGLYLAIATLAAHFILSFAFREW 144
            A L    G+ F+  LP+ G +AA  G+++G P LR+KG YLAI TL    I+      W
Sbjct: 153 YALLNADFGLGFWTVLPIGGALAAVFGILLGFPVLRLKGDYLAIVTLGFGEIVRLVLENW 212

Query: 145 DAVTGGVSGTS-IPRANLFGFELVGDRRN---FYLIFVCAFAMAVAARNLARTHIGRAFV 200
            +VT G SG S I R  LFG EL         +YLI         A   L  + IGRA+ 
Sbjct: 213 GSVTRGPSGISKIARPGLFGMELSVSEATTYIYYLILAAVIFTIFAVGRLKDSRIGRAWQ 272

Query: 201 AVRDRDISAEILGVHLLRTKLTAFAIGAFYAGVAGGLLGYFYGSITPDYFVLTLSVFYLA 260
           A+R+ +I+ E +G+ L  TKLTAFA+GA +AG AG +       I P  F    S   LA
Sbjct: 273 ALREDEIACEAMGIDLTTTKLTAFALGACWAGFAGVIFAAKTTFINPASFTFLESAMILA 332

Query: 261 AVIVGGLGTVLGSVLGAVFMTFVPEGLRLLASVSSQAFPGVAGLLLPMGQVVFGLLIIVF 320
            V++GG+G+ LG VLGA+ +  +PE LR  +                   ++FG  +++ 
Sbjct: 333 MVVLGGMGSTLGVVLGALVLILLPEYLRAFSEYR---------------MLIFGAAMVLM 377

Query: 321 LIFEPHGLAAIWAR 334
           ++F P GL +  +R
Sbjct: 378 MVFRPQGLVSCRSR 391