Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 297 a.a., branched-chain amino acid ABC-type transport system, permease component from Dechlorosoma suillum PS

 Score =  183 bits (464), Expect = 5e-51
 Identities = 110/298 (36%), Positives = 159/298 (53%), Gaps = 9/298 (3%)

Query: 1   MSEFLEYSLLGLLSGGVMALIALSFVLIYKGTGVVNFAVGEVMMLGAYIYYAGAVTFGLP 60
           M  F E  + GLLSG + + +AL FV+IYK +GV NFA G ++   A + + G    G P
Sbjct: 1   MQFFFEVLIGGLLSGVMYSFVALGFVMIYKASGVFNFAQGAMVFFAA-LTFVGFQEMGAP 59

Query: 61  PWVAFALALAVIGVLAIAIERAVLRPLSGQPAVAVLMATIGMASIVHGGVEAVWGGDTLS 120
            W+A  LA   + +L IA ER VLRPL  QP + + MATIG+   V G  + +WG     
Sbjct: 60  FWLALILAFGAMVLLGIATERIVLRPLVNQPHITLFMATIGLTFFVEGLAQGIWGSTVRG 119

Query: 121 PPTLLPRTPLLL----GEVLIPGTVLGNFAVAAVLIGGFLAFFRYSKTGIALRATASDPV 176
               +   P+        +L+    L    VAA L+     FF+Y++ G ALRA A D  
Sbjct: 120 LDLGIQDEPIEWIMDKAGILVSSFDLFAAGVAAALVTLLALFFQYTRVGRALRAVADDHQ 179

Query: 177 TAATLGININYAQRLTWLLSGLVGTFAGVLIASSAGLSPLLASAALSVFAAIILGGLDSI 236
            A ++GI +    R+ W ++G V   AG+L  +  G+   L   AL     +ILGG  S+
Sbjct: 180 AALSIGIPLQNIWRIVWAVAGFVALVAGLLWGARNGVQFALTFTALKALPVLILGGFTSV 239

Query: 237 LGAIVASLLIGWVESVS----AGYLGGKSRDVVPYVVVLAILVVKPYGMFGTRTIERL 290
            GAIV  L+IG  E ++     GY+GG      PYV+ LA L+++P G+FG + I+R+
Sbjct: 240 PGAIVGGLIIGSTEKLAEVYLGGYVGGGIDSWFPYVMALAFLLIRPEGLFGEKHIDRV 297