Pairwise Alignments

Query, 553 a.a., Cyclohexanecarboxylate--CoA ligase from Variovorax sp. SCN45

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  192 bits (489), Expect = 2e-53
 Identities = 155/542 (28%), Positives = 264/542 (48%), Gaps = 38/542 (7%)

Query: 25  TPDDFLAASIDRTPDKAALVGYRADRSEPVRLSYRELGDKVTLAAGALRGLGVLPGDVVA 84
           T  +F      + PD+  LV    DR+  +R +Y+E  ++  L A  L  +G+  GD + 
Sbjct: 7   TIGEFFEKQAQKDPDREFLV--YPDRN--LRFTYKEFDERTDLLAKGLLEIGIKKGDHIG 62

Query: 85  V---QVPNWWEFVVVSLACGRIGAVVNPLMPIFRERELEFMLGFAEAKVLVVPAMFRGFD 141
           +    VP+W  F+    A  +IG V+  +   ++  EL +++  ++ K L +   FR  +
Sbjct: 63  IWARNVPDWLTFM---FATAKIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVN 119

Query: 142 HAA--------MADSLKGRL-----PKLQQVLVVDGQGD----DAFDRVLLGGTARVEPP 184
           +          +  S +G+L     P L+ V+ V  +      +  + +LLG     E  
Sbjct: 120 YLEILYELVPELKTSQRGKLNSEEFPYLKNVIYVGQEKHRGMYNTTELMLLGNYVSDEKL 179

Query: 185 AMASPTPSVLQPGDLSVMMFTSGTTGSPKGVMHTSNTLLACNRALSERFGLTTDDVLLAC 244
             A      L   D+  M +TSGTTG PKGVM T   +L     + E+   T ++ L   
Sbjct: 180 IEAKKG---LDSDDVINMQYTSGTTGFPKGVMLTHKNILNNGYYIGEKQKFTEEERLCLP 236

Query: 245 SPVGHMTGYAAVMMLGIYLGSTVVLQDIWDGKRGVALMAAEGVTYT-AASSPFLSDICNA 303
            P+ H  G    ++  +  G T+V+ +I+D    +A +  E  T      + F+++  + 
Sbjct: 237 VPLFHCFGIVLGVLALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHP 296

Query: 304 VAEGAPRPDRLRSFLCGGAPIPPVLIERAARELDLKVCSL-WGMTE-SLSSTLTEPSRAA 361
           + E       LR+ +  G+  P   +++   ++ ++  ++ +G+TE S   T+T      
Sbjct: 297 MFEMFDLSS-LRTGIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFTMTSVDDPF 355

Query: 362 DKSASTDGRALDGVGIRIVDFD-GKPLPPGETGRLMVRGAQMSLGYYKRPD--IATYDAE 418
           +K   + G+A+    ++I+D + G+ L PG  G +  RG  +  GYYK P+      + +
Sbjct: 356 EKRVESVGKAMPHCEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKD 415

Query: 419 GWFDTGDLAYMDAEGYIRINGRTKDVLIRGGENVPVVEIEALLYKHPAVAMAAIVGFPDD 478
           GW  +GDLA  D +GY +I GR KD++IRGGEN+   EIE  LY  P +  A +VG PD+
Sbjct: 416 GWLHSGDLAVEDEDGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDE 475

Query: 479 RLGERACAFVELRPGATLDLAAVQAYMEACKVAKQYWPERVEVLDMVPRTPSGKIQKYLL 538
           + GE   AFV  + G  +    V+ +    K+A+   P+ V V++  P T SGKIQK+ L
Sbjct: 476 KYGEIVGAFVIPKEGYEIKEEDVRDFALE-KIARYKVPKHVFVVEEFPMTASGKIQKFKL 534

Query: 539 KE 540
            E
Sbjct: 535 TE 536