Pairwise Alignments

Query, 310 a.a., hypothetical protein AF1210 from Variovorax sp. SCN45

Subject, 295 a.a., dehydrocarnitine cleavage enzyme (EC 2.3.1.-) (from data) from Pseudomonas fluorescens FW300-N2E2

 Score =  169 bits (429), Expect = 6e-47
 Identities = 113/315 (35%), Positives = 158/315 (50%), Gaps = 47/315 (14%)

Query: 7   VIITCAVTGAIHTPSMSPHLPITAQEITDAAVGAAEAGAAIIHLHARDPVTGKPDQRPEA 66
           VIITCA+TGA  T + SPH+P+T ++I DAA+ AA+AGA ++H H RDP TGK  +    
Sbjct: 5   VIITCALTGAGDTTAKSPHVPVTPKQIADAAIEAAKAGATVVHCHVRDPQTGKFSRDVAL 64

Query: 67  FVPFLKDIK-ARSDAVINLTTG------------------GSPYMTVQERMMPAKVLKPE 107
           +   ++ I+ A  D ++NLT G                   +  +    R+   + L PE
Sbjct: 65  YREVMERIREADVDIIVNLTAGMGGDLEIGAGEQPMEFGPNTDLVGPLTRLAHVEELLPE 124

Query: 108 VASMNMGTMNFGLFPMLERFKEFKHDWERPYLEGSKDLIFRNTYGDLETVLTELSANQTR 167
           + +++ GT+NF                      G  D I+ +T   L      ++    +
Sbjct: 125 ICTLDCGTLNF----------------------GDGDTIYVSTPAQLRAGAKRITELGVK 162

Query: 168 YEFECYDTSHLYNLAHFVDRGLVKAPFFVQTVFGILGGIGSHPDDVMHMKRTADRLFGAD 227
            E E +DT HL+     +  GL+  P F Q   GI  G    P D   MK   D L  AD
Sbjct: 163 AELEIFDTGHLWFAKQLIKEGLLDNPLF-QLCLGIPWGA---PADTTTMKAMVDNL-PAD 217

Query: 228 YRWSVLGAGRSQMPIAAMSAAMGGNVRVGLEDSLWIGAGRLAETNAQQVRKVREIIEGLG 287
             W+  G GR QMP+AA +  +GGNVRVGLED+LW+  G LA TN Q V +  EI+  LG
Sbjct: 218 AVWAGFGIGRMQMPMAAQAVLLGGNVRVGLEDNLWLDKGVLA-TNGQLVERAGEILSRLG 276

Query: 288 LGVATPAEAREILAL 302
             V TPAE R+ + L
Sbjct: 277 ARVLTPAEGRKKMGL 291