Pairwise Alignments

Query, 512 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 723 a.a., fatty acid oxidation complex subunit alpha FadB from Vibrio cholerae E7946 ATCC 55056

 Score =  111 bits (278), Expect = 8e-29
 Identities = 98/358 (27%), Positives = 167/358 (46%), Gaps = 18/358 (5%)

Query: 11  ADGVLVATLDMPGRSMNVFSAELMDALDALMDRVDSDDAVRSVVVTSAKSSFLAGADLVM 70
           A+G+   +   P  S+N      +++LD  +D + +D +V+ ++++S K +F+ GAD+  
Sbjct: 14  ANGIAELSFCAPA-SVNKLDLHTLESLDKALDALAADSSVKGLLLSSDKEAFIVGADITE 72

Query: 71  VRGFTDHARTGTREEM-FALCGRLGRQFVRLETSAKPWVAAVNGIALGGGLELALACRVR 129
             G          E + FA      R F +LE    P ++A+ G  LGGG E  LA   R
Sbjct: 73  FLGLFAKPEAELDEWLQFA-----NRIFNKLEDLPFPTLSALKGHTLGGGCECVLATDFR 127

Query: 130 LVTDAPRTQLGVPEVRWGLLPGAGGTQRLPRLAGFEPAMDMLLSGRSIAPADAVRFGIFA 189
            + DA  T +G+PE + G++PG GGT RLPRL G + AM+++  G++    +A++ G+  
Sbjct: 128 -IGDAT-TSIGLPETKLGIMPGFGGTVRLPRLIGADSAMEIITQGKACRAEEALKVGLLD 185

Query: 190 RAVPAAQLLDEAKAEARAMHGKPYDANAKFAGFAQADVPAWREDTARAIALRHGVAEADF 249
             V + +L+D A         +  D   +      A   +  E        +  VA+   
Sbjct: 186 AIVDSDKLIDSAITTLTQAIEEKLDWQKRRQQKTSALTLSKLEAMMSFTMAKGMVAQVAG 245

Query: 250 ARYPAYSAIVDSVLKGARLPLSEATDVEMTQFLRLMFNPVA----GNMVRTLFLERLRAE 305
             YPA    V ++ + ARLP   A D+E   F++L  +  A    G  +   +++ L  +
Sbjct: 246 KHYPAPMTSVVTIEEAARLPRDAALDIERKHFIKLAKSTEAQALVGIFLNDQYIKGLAKQ 305

Query: 306 RELAAPDDVR-IEHIGIGAIGAARRAWTDALAKVKLPQAADPALPPDTLELTDTQGRR 362
              AA  D +    +G G +G    A+  AL  V +       + P +LEL  T+  +
Sbjct: 306 SAKAASQDTQHAAVLGAGIMGGG-IAYQSALKGVPVLM---KDIAPHSLELGMTEAAK 359