Pairwise Alignments

Query, 512 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 708 a.a., fatty acid oxidation complex subunit alpha FadJ from Vibrio cholerae E7946 ATCC 55056

 Score =  132 bits (332), Expect = 4e-35
 Identities = 115/389 (29%), Positives = 182/389 (46%), Gaps = 25/389 (6%)

Query: 6   QTALDADGVLVATLDMPGRSMNVFSAELMDALDALMDRVDSDDA-VRSVVVTSAK-SSFL 63
           Q + D        +D+PG  MN   A   + + A+   ++     ++ +++ S K  +F+
Sbjct: 8   QLSFDEQHYAWLAIDVPGEKMNTLQAAFAEEMQAVFATLNEKRGQIKGLIIHSLKPDNFI 67

Query: 64  AGADLVMVRGFTDHARTGTREEMFALCGRLGRQFVRLETSAKPWVAAVNGIALGGGLELA 123
           AGAD+ M+          +  E  AL  +  + F +L     P VAA++G  LGGGLELA
Sbjct: 68  AGADVRMLEACQ------SVHEAQALASQGQQMFQQLADLPFPVVAAIHGPCLGGGLELA 121

Query: 124 LACRVRLVTDAPRTQLGVPEVRWGLLPGAGGTQRLPRLAGFEPAMDMLLSGRSIAPADAV 183
           LAC  R+ T+   T+LG+PEV  GLLPG+GGTQRLPRL G  PA+D++L+G+ +    A 
Sbjct: 122 LACDYRVCTEDEVTRLGLPEVMLGLLPGSGGTQRLPRLIGLLPALDLILTGKQLRAKKAK 181

Query: 184 RFGIFARAVPAAQLLDEAKAEARAMHGKPYDANAKFAGFAQADVPAWREDTARAIALRHG 243
           + G+    VP + LLD AK   R +  K +   A+     +  + A   D  R +     
Sbjct: 182 KLGVVDACVPHSVLLDVAK---RLLEEKGHKKRAQVTLPIKEKLLA-NTDLGRKLIFDQA 237

Query: 244 VAEAD---FARYPAYSAIVDSVLKGARLPLSEATDVEMTQFLRLMFNPVAGNMVRTLFLE 300
             +        YPA  AI++ +  G    +    + E  +F  L+        +R++F  
Sbjct: 238 AKKTQQKTRGNYPAAQAILEVIQYGLEKGMHAGLEYEAKRFAELVMTR-ESKALRSIFFA 296

Query: 301 RLRAERELAA---PDDV-RIEHIGIGAIGAARRAWTDALAK--VKLPQAADPALPPD--- 351
               +++L A   P  V  +  +G G +GA     T A AK  V++   A+  +      
Sbjct: 297 TTEMKKDLGADAKPAPVAAVGVLGGGLMGAGISHVTVAKAKTSVRIKDVANDGVLNALNY 356

Query: 352 TLELTDTQGRRTRVALRVLDEAASADSGG 380
             +L D Q +R  +    L    S  SGG
Sbjct: 357 NYKLFDKQRQRKILTKAQLQAQMSQLSGG 385