Pairwise Alignments

Query, 1089 a.a., RND efflux system, inner membrane transporter from Variovorax sp. SCN45

Subject, 1065 a.a., hydrophobe/amphiphile efflux-1 (HAE1) family transporter from Dechlorosoma suillum PS

 Score = 1508 bits (3905), Expect = 0.0
 Identities = 762/1068 (71%), Positives = 904/1068 (84%), Gaps = 7/1068 (0%)

Query: 1    MNLSKFFIDRPIFAGVLSLLMLIAGLIALRGLPISEYPEVAPPSVVVRAQYPGANPKVIA 60
            MN+SKFFIDRPIFAGVLS+L+L+AG++++  LPISEYPEV PPSVVVRAQYPGANPKVIA
Sbjct: 1    MNISKFFIDRPIFAGVLSILILLAGVLSVFQLPISEYPEVVPPSVVVRAQYPGANPKVIA 60

Query: 61   ETVATPLEEQINGVEGMLYMGSQATTDGVLTLTVTFRLGTDPDKAQQLVQNRVSQAEPRL 120
            ETVA PLEE INGVE MLYM SQA +DG L +TV F+LG DPDKAQQLVQNRVSQA PRL
Sbjct: 61   ETVAAPLEESINGVENMLYMQSQANSDGNLAVTVYFKLGIDPDKAQQLVQNRVSQALPRL 120

Query: 121  PEEVRRLGITTVKSAPDLTMVVHLVSPNNRYDINYLRNYAVLNVKDPLARIEGVGQVQIF 180
            PE+V+RLG+TTVKS+P LT+VVHL+SP++RYD  YLRNYAVLNVKD LAR+ GVG+V I+
Sbjct: 121  PEDVQRLGVTTVKSSPTLTLVVHLLSPDDRYDATYLRNYAVLNVKDRLARLNGVGEVSIW 180

Query: 181  GGGDYSMRVWLDPQKVAQRGLSASDVVAAIRGQNVQAAAGVVGASPGLSGVDMQLSINAQ 240
            G G+Y+MRVWLDPQKVAQRGL+A DVV AIR QNVQ AAGV+GASP    V +Q S+NAQ
Sbjct: 181  GAGNYAMRVWLDPQKVAQRGLTAGDVVRAIREQNVQVAAGVIGASPNAGNVPLQFSVNAQ 240

Query: 241  GRLQSEEEFGDIIVKSGTDGAVTRLRDIGRLEMGAADYSLRSLLNNDPAVGMGVFQAPGS 300
            GRLQ+EEEF DI++KS  +G VTRL D+ R+E+ AA+Y LRSLL+N PA+GMG+ Q+PG+
Sbjct: 241  GRLQTEEEFRDIVLKSSGEGGVTRLGDVARVELDAAEYGLRSLLDNKPAIGMGIMQSPGA 300

Query: 301  NALDISANVRKTMEELNKNMPEGLEYRIAYDPTQFVRASIESVIHTLLEAIMLVVLVVIL 360
            NAL++S+ VR+ M EL K+ P  +EYRI YDPTQFVRASI++V+HTLLEAI LVVLVVI+
Sbjct: 301  NALEVSSQVREAMAELAKDFPASVEYRIEYDPTQFVRASIKAVVHTLLEAIALVVLVVIV 360

Query: 361  FLQTWRASIIPLLAVPVSVIGTFAVLHVLGFSINALSLFGLVLAIGIVVDDAIVVVENVE 420
            FLQTWRASIIPLLAVPVS++GTF+++   G+SINALSLFG+VLAIGIVVDDAIVVVENVE
Sbjct: 361  FLQTWRASIIPLLAVPVSIVGTFSLMLGFGYSINALSLFGMVLAIGIVVDDAIVVVENVE 420

Query: 421  RNIEAGLTPREATYRAMREVSGPIIAIALVLVAVFVPLAFISGLTGQFYRQFAVTIAIST 480
            RNIEAGLTPREATYRAMREVSGPIIAIAL LVAVFVPLAF++GLTGQFY+QFA+TIAIST
Sbjct: 421  RNIEAGLTPREATYRAMREVSGPIIAIALTLVAVFVPLAFMTGLTGQFYKQFAMTIAIST 480

Query: 481  VISAINSLTLSPALAALLLRGHDQPKDALTRGMDRAFGWLFRGFNKLFHRGSEAYSGGVK 540
            VISA NSLTLSPALAA+LL+GH    D LTR M+R  G  F GFN+ F R S+ Y  GV 
Sbjct: 481  VISAFNSLTLSPALAAMLLKGHGSEPDWLTRQMNRYLGGFFAGFNRFFRRASDNYGRGVT 540

Query: 541  NVISRKALMLAIYVALIAVTFGLFKAVPGGFVPAQDKQYLIGFAQLPDGATLDRTDEVIQ 600
             V++RKA  + +Y  L+ +T GL   VPGGFVPAQDKQYLIGFAQLP+GA+LDRT+ VI+
Sbjct: 541  GVLARKASAMGVYAVLLGLTVGLSYLVPGGFVPAQDKQYLIGFAQLPNGASLDRTEAVIR 600

Query: 601  RMGEIMKKNPNVEDAIAFPGLSINGFTNSSNSGIVFATLKPFDQRKRPDQSGGAVAGQLN 660
            +MGEI    P V+ AIAFPGLSINGFTNSS++GIVFATLKPFD+R+  + S  A+AG LN
Sbjct: 601  QMGEIALAQPGVQSAIAFPGLSINGFTNSSSAGIVFATLKPFDERRGKELSAEAIAGALN 660

Query: 661  GAFAGIQDAFIVMFPPPPVAGLGTTGGFKLQLEDRASVGYDQMDAAVKAFMAKAQQAPEL 720
              +A IQ+AFI +FPPPPV GLGT GGFKLQ+EDR ++GY ++D A KAFMA A +APEL
Sbjct: 661  QKYAAIQEAFIAVFPPPPVMGLGTLGGFKLQIEDRGALGYAELDRAAKAFMAAASKAPEL 720

Query: 721  AGMFTSWQVNVPQLYADIDRTKARQLGVPVTDIFDTMQIYLGSLYANDFNKFGRTYSVRV 780
              MF+S+Q+NVPQL  D+DRTKA+Q GV VTD+FDTMQIYLGSLY NDFN+FGR Y VR 
Sbjct: 721  GPMFSSYQINVPQLDVDLDRTKAKQQGVSVTDVFDTMQIYLGSLYVNDFNRFGRVYQVRA 780

Query: 781  QADAPYRARAEDVGLLKVRSTSGEMVPLSALMKVNSTFGPERAMRYNGYLAADINGGPAP 840
            QADAP+R+R ED+  LK R+  GEMVPLS+L+KV++ FGPE  +RYNG+ AADINGGPAP
Sbjct: 781  QADAPFRSRPEDILQLKTRNNQGEMVPLSSLVKVSTGFGPEMVVRYNGFTAADINGGPAP 840

Query: 841  GYSSGQAQDAITKIAAETLPKGVSFEWTELTYQEILAGNSAFLVFPLAILLVFLVLAAQY 900
            G+SS QA+ A+ ++AAETLP+GV FEWT+LTYQ+ILAGN+   VFP+++LLVFLVLAAQY
Sbjct: 841  GFSSAQAEAAVERVAAETLPRGVKFEWTDLTYQKILAGNAGIWVFPISLLLVFLVLAAQY 900

Query: 901  ESLTLPIAIILIVPMGIMAAMAGVWISGGDNNVFTQIGLIVLVGLSAKNAILIVEFAREL 960
            ESLTLP+A+ILIVPM I+AA+ GVW++GGDNN+FTQIGL+VLVGL+ KNAILIVEFAREL
Sbjct: 901  ESLTLPLAVILIVPMSILAALTGVWLTGGDNNIFTQIGLMVLVGLACKNAILIVEFAREL 960

Query: 961  EFAGRTPVQAAIEASRLRLRPILMTSLAFVMGVLPLVLSTGAGSEMRKAMGVAVFAGMIG 1020
            E  G TP++AAI+ASRLRLRPILMTS+AFVMGV+PLVLS+GAGSEMR AMG+AVF GM+G
Sbjct: 961  ELQGSTPLRAAIDASRLRLRPILMTSIAFVMGVVPLVLSSGAGSEMRHAMGIAVFFGMLG 1020

Query: 1021 VTAFGLFLTPVFYVLLRRLAGNRPLKLHGEVPHGEDFVSADHPATPSL 1068
            VT FGLFLTP FYVLLR L  ++  KLH    H      A   A PSL
Sbjct: 1021 VTFFGLFLTPAFYVLLRTL--DKRHKLHSAAHH-----EAPITAVPSL 1061