Pairwise Alignments

Query, 527 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

Subject, 549 a.a., AMP-binding protein from Methanococcus maripaludis S2

 Score =  159 bits (402), Expect = 3e-43
 Identities = 148/530 (27%), Positives = 232/530 (43%), Gaps = 55/530 (10%)

Query: 19  PERPAIVCGD--VRLSYGELEALANRFAEVFRQLGLVRGDHVATLLSNRPEGLAAAWAAW 76
           P+R  +V  D  +R +Y E +   +  A+   ++G+ +GDH+     N P+ L   +A  
Sbjct: 20  PDREFLVYPDRNLRFTYKEFDERTDLLAKGLLEIGIKKGDHIGIWARNVPDWLTFMFATA 79

Query: 77  RSGVYLTPMSTALATPELHYLVEDCDAKAVLVDAQLRD---------LVAALPGA----- 122
           + GV L  ++TA  + EL Y+++  D KA+ +    RD         LV  L  +     
Sbjct: 80  KIGVVLVTVNTAYKSHELAYVMKQSDMKALAIIDSFRDVNYLEILYELVPELKTSQRGKL 139

Query: 123 ------IARSVRWLSSGGH-----------IEGFALLEPLLDAASPAPHADEPPGALMMY 165
                   ++V ++    H           +  +   E L++A       D      M Y
Sbjct: 140 NSEEFPYLKNVIYVGQEKHRGMYNTTELMLLGNYVSDEKLIEAKKGL---DSDDVINMQY 196

Query: 166 TSGTTGAPKGVIRPLLPPEWRGTPPFAADLLDLFQVGGDDVRYLSTAPLYHAAPLRVA-L 224
           TSGTTG PKGV+  L          +  +     Q   ++ R     PL+H   + +  L
Sbjct: 197 TSGTTGFPKGVM--LTHKNILNNGYYIGEK----QKFTEEERLCLPVPLFHCFGIVLGVL 250

Query: 225 AVTAGGGTVYVMERFDAEEALRLIAHEGITHSQWVPAMFQRLLALPAGRRAAFSAPAHRI 284
           A+   GGT+ ++E FD    L  I  E  T    VP MF    + P      F   + R 
Sbjct: 251 ALLTHGGTLVMLEIFDPLLVLAAIQKEKCTAVYGVPTMFIAEFSHPMFEM--FDLSSLRT 308

Query: 285 AVHGAAPCPA-ALKRAMIDWW-GPILLEYYSGSEGVGLTLIDSHEALAKP-GSVGRARKG 341
            +   + CP  A+K+ M D +   I + Y         T+    +   K   SVG+A   
Sbjct: 309 GIMAGSTCPIEAMKKVMSDMYMREITISYGLTEASPVFTMTSVDDPFEKRVESVGKAMPH 368

Query: 342 V-LHIVDAE-GAELPAGQTGIVYFSGVKPF-AYHKAPQKTSGRTHAQGWQTFGDMGHVDE 398
             + I+D E G  L  G  G +   G      Y+K P+KT+      GW   GD+   DE
Sbjct: 369 CEVKIIDPETGETLAPGNVGEICCRGYNVMKGYYKMPEKTAEVIEKDGWLHSGDLAVEDE 428

Query: 399 DGWLFLTDRQDDMIISGGVNIYPQEIEAAMLEVAGVWECSVVGVPDERFGERPVAFVVPA 458
           DG+  +  R  DMII GG NIYP+EIE  +  + G+ +  VVG+PDE++GE   AFV+P 
Sbjct: 429 DGYYKIVGRIKDMIIRGGENIYPREIEEFLYTMPGINDAQVVGIPDEKYGEIVGAFVIPK 488

Query: 459 RDAAHDTTALLARVRAHNSQRLGRLKQPDEIHLIDSLPRTATGKVLRREL 508
                        VR    +++ R K P  + +++  P TA+GK+ + +L
Sbjct: 489 EGYEIKE----EDVRDFALEKIARYKVPKHVFVVEEFPMTASGKIQKFKL 534