Pairwise Alignments

Query, 331 a.a., oxidoreductase FAD/NAD(P)-binding domain protein from Variovorax sp. SCN45

Subject, 405 a.a., Na(+)-translocating NADH-quinone reductase subunit F (RefSeq) from Shewanella sp. ANA-3

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 86/386 (22%), Positives = 156/386 (40%), Gaps = 78/386 (20%)

Query: 7   VTLLFSDGVAHRLAVPCGQKLVEAAGQAGLHLLTDCSNG-RCGTCTARLLSGAIDMGDYD 65
           +T+  +D     + V  G KL+ A     + + + C  G  CG C  ++ SG  D+   +
Sbjct: 34  ITIGINDDAEKSIKVAAGDKLLGALASKNIFIPSACGGGGTCGQCRVKVKSGGGDILPTE 93

Query: 66  TSVLPDDDRDAGGVLPCVCRVAGACAVEFPYESAEVLADVPPPIAGRVVAVRRIASETV- 124
              +   +   G      CR+A   AV+          D+   +   +  V++   E + 
Sbjct: 94  QGHITKKEAKEG------CRLACQVAVK---------TDMELELEEEIFGVKKWQCEVIS 138

Query: 125 -----------LLQISIAKGVQFEPGQYVRIQPEG------------------------- 148
                      LL++   + V F+ G Y++I+                            
Sbjct: 139 NDNKATFIKELLLKLPEGEDVHFKAGGYIQIEAPAHVVKYADFDIPAKYRDDWEKYGLFD 198

Query: 149 ------TDISRSYSMANVPGSNA-LEFFVRL-------VPDGAFSNWLASAKAGDQVQLS 194
                  D+ R+YSMAN P     +   VR+       VP G  S+++ + KAGD+V +S
Sbjct: 199 LVSTVNEDVLRAYSMANYPDEKGRIMLNVRIATPPSANVPPGKMSSYIFNLKAGDKVTIS 258

Query: 195 SPHGTFFLRDEERPRLFVAGGTGVAPFLS-MLRAMSQKARAQPTTLLIGARTHGHLFALE 253
            P G FF++D +   +F+ GG G+AP  S +   +  K   +  +   GAR+   +F  +
Sbjct: 259 GPFGEFFVKDTDAEMVFIGGGAGMAPMRSHIFDQLKSKKTKRKMSFWYGARSTREVFYQQ 318

Query: 254 ELETLRQASPNIQVRLAVEQDADGDCHHGYATDLIAGLGLDPATR---------VYLCGP 304
           + + L   + N    +A+ +    D   GY T  I  +  +   +          Y+CGP
Sbjct: 319 DFDALAAENDNFVWHVALSEPLPEDNWTGY-TGFIHNVIYENYLKHHKAPEDCEYYMCGP 377

Query: 305 PPMVEAGRKAAEAAGLPRQDVLCERF 330
           P M  +  +  E+ G+  +++L + F
Sbjct: 378 PIMNSSVIRMLESLGVEPENILLDDF 403