Pairwise Alignments

Query, 308 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 296 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 67/286 (23%), Positives = 129/286 (45%), Gaps = 5/286 (1%)

Query: 18  VRQLRAFVAIYHTGSISAAAQELALTQPAVTMLLRELETKLGMSLFDRHTRALHRTDAAT 77
           ++ L  F+ +  TG+ + AA++  +TQP ++ +++ LE  LG  L  R+ + +  T A  
Sbjct: 5   IKTLHYFLTLVETGNFTRAAEKSFITQPTLSKIIQRLEENLGQQLLHRNNQKIELTQAGI 64

Query: 78  RAIGFAQRALAEMEGLSTSMSELAGLHAGRVRVVATAAVAQAMLPPAMRRFLEKHPEVSL 137
                A+  L +   L   ++ L+GL +G +R +    +  +++   +  F +++P + L
Sbjct: 65  LLENSAREILGQWHRLQEDLTNLSGLKSGHLR-LGVCPMMSSLIIDLLTAFRQQYPGIEL 123

Query: 138 EIEEVGPADFVNAIDNSQVDFGVGTLEAP-VAGLREEVLVRETLVAAALRSPTFTGGVPM 196
           ++ E G      A+ N+ +D     L       L    L R  L+A   +         +
Sbjct: 124 QMYEYGGFGCEQALLNNSLDIAFTALPTTHDIELANRALTRYPLLACLPKDHALAQQEAV 183

Query: 197 TWKQLSALPLVTVRSGYGIRGRIDAAAREAGVQLRIAHEVSLLSTAVALAANGLGVVVLP 256
           TW+   A P +     + +   I   + +AGVQL IA           +    +GV +LP
Sbjct: 184 TWQDFEAYPFILYNEDFSLAKLITRLSHKAGVQLNIAFRSGQWDFLATMVEAQMGVAILP 243

Query: 257 PSIV--AHETKLVTQRLMRPTIERVIGVHLHKERSLSPAAKAFLQV 300
             I      ++LV + + RP +   + +   K+  L+PAA+A L +
Sbjct: 244 EPICHKLQGSELVFKPI-RPNLTWDLALIWRKDLPLTPAAQALLDL 288