Pairwise Alignments

Query, 323 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

Subject, 326 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  288 bits (737), Expect = 1e-82
 Identities = 159/319 (49%), Positives = 209/319 (65%), Gaps = 7/319 (2%)

Query: 5   VAFLLVPEFQLFDMAGPLSVFQVAAEIGRGRRGPAYEVAVLSERGGRVACSAGLEMHTRA 64
           + F++ P FQL   A  ++ F++A  +  G     YE+ +LSE GG V  SAG  + T+ 
Sbjct: 15  IGFVVFPRFQLMGFAA-VTAFEMA-NLALGET--VYEIELLSEAGGEVKSSAGFGVLTKT 70

Query: 65  WRDSQAGTVIVPGGVGARKPGAATPALMQHLRGALAAKRRVASVCTGAFLLAEAGLLDGR 124
           +  +   TV+   GV        TP L++  R +    RRVA+ CTGAF+LAE+GLLDGR
Sbjct: 71  FDHTAYDTVMFGAGVQIEP---MTPGLVEFARRSFETARRVAAPCTGAFVLAESGLLDGR 127

Query: 125 HATTHWRQAALLQRNYPAITVDADRIFVRDGNVWSSAGIAAGIDLALAMVEADLGADTAG 184
            ATTHW  A  LQ  +PA+ V+ DRIF+ DG+VW+SAG+ A IDLALAMVE D G   A 
Sbjct: 128 RATTHWAFARQLQDRFPAVKVEEDRIFIVDGSVWTSAGMTASIDLALAMVEKDYGQGVAR 187

Query: 185 AVAREMVVYHRRTGGQSQFSALQDLAPQSGRMRAVLAYIGENLTADLDIERLAEVACVSP 244
           +VAR++VVYHRR GGQSQFSAL +L P+S R++  + Y   NL   L +E LA+ A +S 
Sbjct: 188 SVARKLVVYHRRAGGQSQFSALLELEPKSDRIQRSIDYAKANLRRGLSVEELADAAGLSA 247

Query: 245 RQFMRAFKAETGQTPAKAVERIRAEVARTHIEGGDSSIEAVARLTGFEDTERMRRAFVRV 304
           RQF RAF+AETGQ+PAKAVE +R E AR  +E G  S++ +A  TGF   +RMRRAF+R 
Sbjct: 248 RQFSRAFRAETGQSPAKAVETLRVEAARLMMEQGRHSMDVIAEETGFAIADRMRRAFLRT 307

Query: 305 YGQPPQALRRIARAAAPAP 323
            GQPPQ +RR AR +A  P
Sbjct: 308 LGQPPQTIRRNARESASVP 326