Pairwise Alignments

Query, 420 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 434 a.a., MFS transporter from Methanococcus maripaludis S2

 Score = 99.8 bits (247), Expect = 1e-25
 Identities = 89/394 (22%), Positives = 158/394 (40%), Gaps = 35/394 (8%)

Query: 18  VPLVILAFGHTLSNLLRTLPAMATDVMSLDMGTTAALLGLLTGVYHLFFALGQLPAGVML 77
           V   +LA  +      R  PA+    +    G  A  +GLL  VY   +AL Q+P+G+M 
Sbjct: 16  VIFAVLALVYFFVYFHRVSPAVMAGDLMTTFGVGATSMGLLGSVYFYAYALMQIPSGIMS 75

Query: 78  DRLGVRTVSLSLFAMTALGCVAAALAQGPVGFFAAQALLGLGCCGMLLCPFALAARALPP 137
           D+ G R V      +TA G +   +A         + L+G+G   + +    + +     
Sbjct: 76  DKFGPRRVVAVFTLVTAAGAILTGIATDFNMVIMGRLLIGIGAAAVYIPIMKMLSIWFRK 135

Query: 138 ARFAMWSGLILSIGNCGMLLSATPMAWLIERHGWRASFWLAGAMAIGIGVLVALAVPRHP 197
             FA  SG++L++GN G L +A P+A+L    GW+  F   G  +I + +L  + V   P
Sbjct: 136 NEFATQSGMMLAVGNIGALSAAAPLAYLNTALGWQTVFTGLGVASIALAILSYIVVRDKP 195

Query: 198 ----------------------RTAPAPARRLKTELREVLALTASLPLRGPVVLAFTSLA 235
                                    PA    +   ++ VL   +  PL    +  F    
Sbjct: 196 SEMGFANIEDIEAHENGETVSAEAKPAENISIMDSIKMVLGKKSFWPL---AIWFFFYYG 252

Query: 236 AVLAVRGVWGGPWFMDVKGLTRIEAGNALIPLTLAVAIGPLVAGAL-DRLTGARRALLAG 294
           +++A +G+W GP+  D+ G  +      L  + + + IG  V+G + D++  +R+  L  
Sbjct: 253 SLMAYQGLWAGPYLKDILGWDKATYAGLLTFIGIGLIIGCPVSGYIADKVLKSRKKTLII 312

Query: 295 SHLAAAGLLLVVVAAAPLGRESAHGVLGSASFDAWVFFVFGCCMSTQPLLFAMGQSATAR 354
             +    L   V     +     + +L         + +FG       + +   +S    
Sbjct: 313 GTIMYTLLWFAVWYFNGMDNPLFYKIL---------YLLFGFFAGFFVVCYGQVKSLFPI 363

Query: 355 ESAGKALAALNLMFFCGTAFHQLASGAIASAFGL 388
              G + + LN   F G A  Q   G + +++GL
Sbjct: 364 SITGTSTSLLNFFPFFGGAVLQQVCGLVIASYGL 397