Pairwise Alignments

Query, 420 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 445 a.a., 2-deoxy-D-ribonate transporter 1 (from data) from Klebsiella michiganensis M5al

 Score = 88.6 bits (218), Expect = 3e-22
 Identities = 115/437 (26%), Positives = 183/437 (41%), Gaps = 62/437 (14%)

Query: 18  VPLVILAFGHTLSNLLRTLPAMATDVMSLDMGTTAALLGLLTGVYHLFFALGQLPAGVML 77
           +PL+I+A+   +S + RT   MA   MS+D+G +A   GL  G++ L +A+ ++P+ + L
Sbjct: 26  MPLLIVAY--IISFIDRTNIGMAKATMSVDIGLSATAFGLGAGLFFLTYAVLEIPSNLFL 83

Query: 78  DRLGVRTVSLSLFAMTALGCVAAALAQGPVGFFAAQALLGLGCCGM-------LLCPFAL 130
            R+G R     +     +     A   GP  F+  + LLG    G+       L   F  
Sbjct: 84  TRIGARRWIARIMITWGIISCGMAFVTGPTSFYVMRLLLGAAEAGLYPGIIYYLTLWFGR 143

Query: 131 AARALPPARFAMWSGLILSIGN--CGMLLSATPMA-WLIERHGWRASFWLAGAMAIGIGV 187
             RA     F +   L   IG    G+LLS   M+ W    HGW+  F++ G  AI +  
Sbjct: 144 EERAKATGLFLLGVCLANIIGAPLGGLLLSLDGMSGW----HGWQWMFFIEGLPAIALAF 199

Query: 188 LVALAVPRHPRTAPAPARRLKTELREVLALTASL----------PLRGPVVLAFTSLAAV 237
           +V   +P      PA AR L  +  +V A+TA L          P R  +  A T+   +
Sbjct: 200 VVWRRLP----DKPADARWL--DSHDVQAITAVLEKEAEETRHTPSRFSLKTALTTRVFL 253

Query: 238 LAVR-------GVWGGPWFM-DVKG----LTRIEAGNALIPLTLAVAIGPLVAGALDRLT 285
           L V         V+G  +F+  + G    LT ++ G       +A A G ++     R  
Sbjct: 254 LLVLIYFTHQFSVYGLSYFLPGIIGSWGQLTPLQIGLLTAIPWIAAAAGGILLPRFARTE 313

Query: 286 GARRALLAGSHLAAAGLLLVVVAAAPLGRESAHGV-LGSASFDAWVFFVFGCCMSTQPLL 344
              R++L   +       LV+     +G  + HGV L   S  A++FF      + Q ++
Sbjct: 314 QRSRSMLMAGY-------LVMATGMAIGAIAGHGVALLGFSLAAFMFF------AMQSII 360

Query: 345 FAMGQSATARESAGKALAALNLMFFCGTAFHQLASGAIASAFGLAPVFVYFAVFL----A 400
           F    S  +      +   LN +  CG        GA     G A   ++FAV L    A
Sbjct: 361 FNWLPSIMSGHMLAGSFGLLNCLGLCGGFLGPFILGAFEDRTGAATSGLWFAVALLIVGA 420

Query: 401 VSALLFLRCTRRAPTAA 417
           +++LL    +   P +A
Sbjct: 421 LASLLIKSSSSSTPASA 437



 Score = 33.1 bits (74), Expect = 2e-05
 Identities = 53/204 (25%), Positives = 82/204 (40%), Gaps = 28/204 (13%)

Query: 20  LVILAFGHTLS--NLLRTLPAMATDVMSLDMGTTAALLGLLTGVYHLFFALGQLPAGVML 77
           LV++ F H  S   L   LP +      L    T   +GLLT +  +  A G    G++L
Sbjct: 255 LVLIYFTHQFSVYGLSYFLPGIIGSWGQL----TPLQIGLLTAIPWIAAAAG----GILL 306

Query: 78  DRLG-----VRTVSLSLFAMTALGCVAAALAQGPVGFFAAQALLGLGCCG-MLLCPFALA 131
            R        R++ ++ + + A G    A+A   V      ALLG      M     ++ 
Sbjct: 307 PRFARTEQRSRSMLMAGYLVMATGMAIGAIAGHGV------ALLGFSLAAFMFFAMQSII 360

Query: 132 ARALPPAR----FAMWSGLILSIGNCGMLLSATPMAWLIERHGWRAS-FWLAGAMAIGIG 186
              LP        A   GL+  +G CG  L    +    +R G   S  W A A+ I +G
Sbjct: 361 FNWLPSIMSGHMLAGSFGLLNCLGLCGGFLGPFILGAFEDRTGAATSGLWFAVALLI-VG 419

Query: 187 VLVALAVPRHPRTAPAPARRLKTE 210
            L +L +     + PA A++ + E
Sbjct: 420 ALASLLIKSSSSSTPASAKQARGE 443