Pairwise Alignments
Query, 1340 a.a., hypothetical protein from Variovorax sp. SCN45
Subject, 709 a.a., Outer membrane autotransporter barrel from Pseudomonas syringae pv. syringae B728a
Score = 92.4 bits (228), Expect = 1e-22
Identities = 171/722 (23%), Positives = 279/722 (38%), Gaps = 111/722 (15%)
Query: 624 VNHAGGETTLFGDIDAGRAKFVNQSGGVLDIWDQPVLGQATFVNQKGGLVVL--RNVTAN 681
++ GG T L G+ + ++ + + D +L +T LVV N+T
Sbjct: 44 ISSYGGRTELTGNTLV-KDGMLSDGDARVSVKDSTILSDSTIA-----LVVQGNSNMTLE 97
Query: 682 SVSIGSLEGGGNVLIGAKSLVVGG-LGTSTEVSGVISGTGGSLVKVGTGALTLSGANTYT 740
+ GG V A +L+ +G+ G +G G + + S +
Sbjct: 98 HSVVEGKGGGITVAEDAFALISNTQVGSLQGEVGRHTGWGVGIFGARADITSRSYIKGLS 157
Query: 741 GGTMLRQGRLNVGSSQALGTGTLSMDDDTTLGFSADGLTIANTIHLTGQ--LDPIIDTGA 798
G RL VG G LS+D+ T +GLT A I + G+ + + D
Sbjct: 158 HGVWFTHPRLTVGDGTQFNYGQLSIDNSTV-----EGLTGA-AIRVEGREGISHLADIEI 211
Query: 799 FSGTLSGAISGGGFITK---EGTGTL-----TLSGANTYTGATNVAQGTLRAGAANTFSA 850
+ TL +SG G + + + T TL+G N T+ TL+ GA
Sbjct: 212 KNNTL--LLSGNGMLLEVLNQSTANFNVDNSTLNG-NLVADDTSTLNITLQNGAQLNGDI 268
Query: 851 ASAHSVA--AGATLDLAGFNQTLASLANSGTVSLAGAAAGTTLTVNGNYVGNNGVLKLGT 908
+ + +A +G+ + G N + G VS AG T ++ N + G L
Sbjct: 269 VNGNRLAITSGSHWQMQGDNAVRSLSLQGGRVSFAGEGFHT---LSLNELSGAGTFGLRV 325
Query: 909 ALNGTGPSDRLVINGGTASGKTSVQIANLGGLGALTTGNGIEVVTAQNGAKTTAQTTK-D 967
L+ G D + +NG ASG+ +++ N G+EVV+A T D
Sbjct: 326 DLDN-GVGDLIDVNG-QASGQFGLRVRN----------TGVEVVSADMAPLKVVHTEGGD 373
Query: 968 A-FSLAGGHVDAGAYEYRLYAADASGAGESWYLRSSTNAGVTPANPAGVPVATYRAEASL 1026
A FSL GG VD GAY Y L G W++ ++P+ + + A Y A ++
Sbjct: 374 AQFSLLGGRVDLGAYSYLL-----EQQGNDWFIVGKDKV-ISPSTQSAL--ALYSAAPAI 425
Query: 1027 YATLPNQLRQGSLAMLGDLRKRVGDDDVKGTAPSATGAERRAWARVLSTDIDIQQGGAVS 1086
+ ++ L LR R+G+ G A A S +D +Q
Sbjct: 426 W-----------MSELSTLRSRMGEVRASGRAGGWMRAYGNRLNATTSDGVDYRQ----- 469
Query: 1087 PTSKGRLTGFQAGTDLLATPNWRAGIYVGQLDGDARVNGFASGIQNLGVGRNDLRSQYVG 1146
+ +G G D + + VG L G + SGI + S Y G
Sbjct: 470 -----KQSGLSLGADAPVEVS-NGQLVVGVLGGYS-----TSGIDLSRGTTGKVDSYYAG 518
Query: 1147 VYGTYTSDSGFYADAVVQSGRHRYTIEPLMSIGAAGKG----NSLLGSIEVGQAFPIGSS 1202
Y T+ SD G+Y D V++ R R + MS + KG N + G +E G+ + +
Sbjct: 519 AYATWLSDDGYYVDGVLKLNRFRNKADVAMSDASKAKGDYTNNGIGGWVEFGRHIKL-AD 577
Query: 1203 GWTVEPQLQLIHQHMDLSNSAIVGAIAQPQADSGWVAR--AGVRVKGQIDTGM------- 1253
+ +EP QL S++V + + D+G A+ V G++ T +
Sbjct: 578 DYFLEPFAQL---------SSVVVQGQELRLDNGMKAKNDQTQSVLGKVGTSLGRSVALK 628
Query: 1254 --GALQPYGRFNVYKTSSGADIARFVNGATTTDIAAPTGGTSTELAGGFTLGLNASTSLY 1311
G LQPY R + + S + + A G+ EL G ++ L+ L+
Sbjct: 629 DGGVLQPYVRVAIAQEFSRRNEVK----ANDVKFDNSLFGSRGELGAGVSVSLSERLKLH 684
Query: 1312 GE 1313
+
Sbjct: 685 AD 686
Score = 27.3 bits (59), Expect = 0.005
Identities = 61/271 (22%), Positives = 100/271 (36%), Gaps = 24/271 (8%)
Query: 272 DGTLLNSGNIIGGNGGASGLFVTTPIGGTPALPAPA-EGG-VGVVGSNLNIVNIGVISGG 329
+G LN G+I+ GN A + G A+ + + +GG V G + +++ +SG
Sbjct: 260 NGAQLN-GDIVNGNRLAITSGSHWQMQGDNAVRSLSLQGGRVSFAGEGFHTLSLNELSGA 318
Query: 330 YASGHQGDPNYRAAAIVFTGGTNRLELRRDASFGGVVDASRGTNTLALGGTDDRRFDVSL 389
G + D + ++ G + GV S L + T+ SL
Sbjct: 319 GTFGLRVDLDNGVGDLIDVNGQASGQFGLRVRNTGVEVVSADMAPLKVVHTEGGDAQFSL 378
Query: 390 IGNAGQFRGFASFEKTGTANWILDNTTTAVTPWTLRQGTLTISSDASLGDVSGKLTLDGG 449
+G ++ + +W + ++P T Q L + S A +S TL
Sbjct: 379 LGGRVDLGAYSYLLEQQGNDWFIVGKDKVISPST--QSALALYSAAPAIWMSELSTL--- 433
Query: 450 TLQTSQSIATSRAIAIGANGGAVEVDLARVLTLNGTISGGSTGTLVKSGQGRMELNAAST 509
SR + A+G A A LN T S G +SG + L A +
Sbjct: 434 ---------RSRMGEVRASGRAGGWMRAYGNRLNATTSDGVDYRQKQSG---LSLGADAP 481
Query: 510 YGGGTSVVGGELHVGITGALGTGPVSVGAGT 540
V G+L VG+ G T + + GT
Sbjct: 482 ----VEVSNGQLVVGVLGGYSTSGIDLSRGT 508