Pairwise Alignments

Query, 347 a.a., no description from Variovorax sp. SCN45

Subject, 298 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  163 bits (413), Expect = 5e-45
 Identities = 99/286 (34%), Positives = 138/286 (48%), Gaps = 5/286 (1%)

Query: 13  DLNLLRVVVTLGNTRSVTHAAAALGMSQSGFSSALARLRQLCGDPLFVRTASGMSPTPRA 72
           DLNL  V   +   R++T AA  L ++Q   S+AL+RLR    DPLF+RT   M PTP A
Sbjct: 7   DLNLFVVFDAIYTERNLTRAAERLCITQPAVSNALSRLRTSLNDPLFIRTPKAMMPTPVA 66

Query: 73  ERMVATARSVLAQVAEGVLGQPEFDAATTRTEFRLAMADVAEIVFLPRLLRHFQVHAPHA 132
           E M+   R  L  ++  +     FD       F+L M DV E   LP LL   QVHAP  
Sbjct: 67  ENMIGQVREALKLLSSSMHLGDSFDPLLAEHHFQLGMFDVTEETMLPSLLAALQVHAPRL 126

Query: 133 RVVCVTLPNGPLQQAMASGEIDLALGYFPDLNAQSFFRQRLYVHTYACMVRKGHPLEGSR 192
            +    +    + +   SG +DLA+   P +     +   L    Y C+VRK HP  G  
Sbjct: 127 SISSYPVSREEMLKEFVSGRLDLAID-APIVTHPDLYHHPLVTVPYVCLVRKDHPEVGDT 185

Query: 193 LTQKAYLNHGHADVASPARSNEFFDKFLTRRGLQRRIVLSTQHHMSLPAIIEATDLLATV 252
           L+ + YL   H  V+S  +   + D  L R G  R I + T+HH + P ++  T+L  TV
Sbjct: 186 LSLEQYLALSHVHVSSRRQGVGYVDAALNRLGKHRNIQVRTKHHQAAPKLVAETNLATTV 245

Query: 253 PLATGARFAQLGAVQLLGLPFQPPTFAVQAHWHRLVHHDARNRWLR 298
           P       A+   +++L LPF+        +WHR    D  NRWLR
Sbjct: 246 P----ESLAKNTDLKVLKLPFEVEPIEWHLYWHRSADQDNANRWLR 287