Pairwise Alignments

Query, 1008 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 685 a.a., GGDEF-domain containing protein from Vibrio cholerae E7946 ATCC 55056

 Score =  329 bits (844), Expect = 3e-94
 Identities = 182/468 (38%), Positives = 273/468 (58%), Gaps = 26/468 (5%)

Query: 529 RHAHDKDWFEISVSRKSIGAGEDARFIVILRNITESKRAAREIEHLAFYDTLTGLPNRRL 588
           R  HD +  E++ + +S+  G++         + ESK     +  LA+YD+LTGL NR L
Sbjct: 210 RLTHDDELSELASTFQSMWKGKE---------LAESK-----LNQLAYYDSLTGLANRSL 255

Query: 589 LLDRLKRAIGATARGSRRCALLFLDLDNFKTLNDALGHDIGDVMLKQVAQRLQDCLREGD 648
           LL +L  AI           L +LDLD FKT+ND+LGH IGD ++K VA R++   +   
Sbjct: 256 LLQKLSDAIETAQNSHSTGVLFYLDLDRFKTINDSLGHTIGDQLIKAVALRMEAWTKNDY 315

Query: 649 MVARLGGDEFVVILEDLSTQTVVATSQTETMGAAILARLNKPYQLGLQQHHSTCSIGAAL 708
           + AR+GGDEF V++  LS       ++ E +   +L  ++ PY +   Q + T SIG ++
Sbjct: 316 LSARIGGDEFAVLIPYLSP------AKAEEVAKQLLTLISNPYAVDDHQFYCTVSIGISV 369

Query: 709 FDAKNASMEEVLKQADIAMYYAKTDGGNALRFFEAGMQTTITARATLESELHTAIADRQF 768
           F +  +   +VL+QAD A+Y AK  G N   F+E  MQ  + +   +E  LH A+  RQ 
Sbjct: 370 FPSVGSCNIDVLRQADTALYRAKASGRNKFMFYEPEMQAQVESFLEIEKGLHEALNQRQL 429

Query: 769 VLHFQSQVTHENKVTGAEVLVRWRHPVRGLLLPHEFIDVAEDTGLIIPLGLWVLETACAQ 828
            L +Q QV  ++ + G E L+RW HP RGLL P  F+ +AE+TG I+P+G W++E AC Q
Sbjct: 430 ELFYQPQVDEQHNIIGVEALIRWNHPKRGLLPPGVFMPIAEETGQILPIGNWIIEQACYQ 489

Query: 829 LMAWRDD----PRRRHLQLSVNVSARQFREQDFVDQVRLVFKRTGADPRKLKLELTESLL 884
              W+      P  R  +L++N+S  QF ++ F++QV    ++ G     ++LE+TESLL
Sbjct: 490 YAQWKKQGILPPHFR--RLAINISPLQFAQESFIEQVNHALRQAGITGEPIELEITESLL 547

Query: 885 HEKVIDAIGKMNALAALGIQFSMDDFGTGYSSLSYMTQLPLSQIKIDKFFVHSIGLNPKV 944
            E V  AI KM  L    I  S+DDFGTGYSSL Y+  L +  +KID+ FV+ + L+   
Sbjct: 548 LENVESAIEKMAKLKESQISISIDDFGTGYSSLRYLKHLAVDVLKIDRSFVNQLHLDDND 607

Query: 945 ELIIQTIIGMARNLELQIVAEGVETQAQRDFLERHGCRVCQGYLFGRP 992
           + I+ TI+ +AR L L+++AEGVE  ++   L++ GC   QGYLF +P
Sbjct: 608 QAIVDTILAIARKLNLEVIAEGVEDTSELAALKKLGCNQFQGYLFDKP 655