Pairwise Alignments

Query, 300 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 246 a.a., ABC transporter permease from Klebsiella michiganensis M5al

 Score =  143 bits (360), Expect = 4e-39
 Identities = 80/247 (32%), Positives = 139/247 (56%), Gaps = 8/247 (3%)

Query: 44  QSILLLAALLGAWEAAVRLFKVPQHLVPPVSDIVVALWRGLATGPLAKDGFWYHGGVTVT 103
           ++ ++   LL  W  A R   +P  L+P  S +  ALW       + +     H  +T++
Sbjct: 7   RAAVVFCGLLLLWWLASRS-GIPAFLLPSPSAVASALW-------VNRSYLGEHTLITLS 58

Query: 104 EILLGFLIGSGVGLAIGIVVSQMPKVEALLEPYVAALQSVPKVAVAPIIVVWLGFGIGSK 163
           EIL G ++G+ +G+ + + +   P+++  L P V   Q++P  A+AP++V+W GFG+G+K
Sbjct: 59  EILSGLVLGALLGVTLALCMIVSPRLQRWLMPLVLTSQAIPVFALAPLLVLWFGFGMGAK 118

Query: 164 VMIICLLTFFPVLVTSIAGFKAVDPDRIDLLRSLSATPWQIFRKAKFPSALPYIFAGLNM 223
           VM+  L+ FFPV      G + V+ D +DL R++ A+     R  +  +ALP + +GL M
Sbjct: 119 VMMAVLVIFFPVTSAFFDGLRRVNRDYLDLARTMGASFGAQLRHVRMMAALPALGSGLRM 178

Query: 224 AAAFSVVGAVVGEFVGAQAGLGVLILQMEAQADTGGSFAVCVVLSVIGIVLSSLLRRIQR 283
           AAA + +GA++GE+VG+  GLG ++L   A+  T   FA   +L V+ ++L   +     
Sbjct: 179 AAAVAPIGAIIGEWVGSAEGLGYVMLNANARLQTDICFAALFILVVLTVLLWLAVDAFLH 238

Query: 284 RVLHWMP 290
           R++ W P
Sbjct: 239 RLIDWTP 245