Pairwise Alignments

Query, 338 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

Subject, 342 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  371 bits (953), Expect = e-107
 Identities = 180/336 (53%), Positives = 242/336 (72%), Gaps = 4/336 (1%)

Query: 3   IVRIAAAMLLGICISGAATAGQTFDAVKKRGIVQCGVSTNLPGFAFTDSKGEWQGIDVDT 62
           +V  ++AML       A+ A  T D V  +G + CGVST LPGF+  ++KGEW+GIDV+ 
Sbjct: 11  VVAASSAMLS----LSASAAESTLDKVLSQGFITCGVSTGLPGFSNPNAKGEWEGIDVEY 66

Query: 63  CRAIAAAMFGNASKFKVVPLTTQARFTALQSGEVDVLTRNTTQTMSRDTTLGLIGVGVNF 122
           C+A+AAA+ G+ +K K VPLT + RFTALQSGE+DVL+RNTT T+ RD+ LGL  VGVN+
Sbjct: 67  CQAMAAAVLGDKTKVKFVPLTAKERFTALQSGEIDVLSRNTTWTLQRDSALGLNFVGVNY 126

Query: 123 YDSQGIMVTKDANVTSARKLAGATICVLPGTTTELNLTDWFRGLKIEFKPVLLDTVDEIK 182
           YD QG MV KD  V SA++L GA++CV  GTTTELNL D+FR   + +KPV+ DT  +  
Sbjct: 127 YDGQGFMVKKDLGVKSAKELNGASVCVQSGTTTELNLADYFRNSGMTYKPVVFDTAAQTS 186

Query: 183 RAFVSGRCDGITMDKSQLALSRASFANAEKYLILPEALSKEPLGPMVRQGDEAWFNVVRW 242
           + F +GRCD +T D+S L   R +    +  ++LPE +SKEPLGP+VRQ D+ WFNV +W
Sbjct: 187 KGFDAGRCDVLTTDQSGLYALRLNLEKPDSAVVLPEIISKEPLGPVVRQDDDKWFNVAKW 246

Query: 243 TLNAMLEAEEYNLSSKNVDDVSKAAPPHIQRILGLSPGLGKGLGLDDKWAYNIIKQVGNY 302
            L AM+ AEEY ++SKNVD++ K+  P ++RILGL    G GLG+ D W+Y I+KQVGNY
Sbjct: 247 VLYAMVNAEEYGITSKNVDEMMKSDNPEVKRILGLDGPKGTGLGIRDDWSYQIVKQVGNY 306

Query: 303 GEIFDRSLGASSPMKLERGLNALYTRGGLMYGWPIR 338
           GE FDR++G+ SP+K++RG+NAL+  GG MY  PIR
Sbjct: 307 GESFDRTVGSGSPLKIDRGVNALWNAGGFMYAPPIR 342