Pairwise Alignments

Query, 226 a.a., L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 1 AapQ from Variovorax sp. SCN45

Subject, 298 a.a., amino acid ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 85.5 bits (210), Expect = 1e-21
 Identities = 52/126 (41%), Positives = 72/126 (57%), Gaps = 3/126 (2%)

Query: 98  LLAGLITY---TAAFIAEIVRAGIQAIGQGQWEAAQSLGLRRGKVLRLVIVPQALRVIVP 154
           LL+G++     ++A+IAEIVRAG+  I QGQWEAA SLGL      R VI PQ L  I P
Sbjct: 166 LLSGVLCIGLLSSAYIAEIVRAGLANIPQGQWEAADSLGLPTWGKYRYVIAPQVLTAITP 225

Query: 155 PLTSQYLNLIKHSSLAVAIGYPDLVSVVNTTLNQTGQAIEGILIIMGAFMTVSLLISLLM 214
            L  Q ++LIK +S+   I   +L  V +   N +G   E  LI+  A++ + L +S+L 
Sbjct: 226 ALAGQTISLIKDTSIISLISIQELTFVGSEIANSSGLIFEIWLIVGAAYLVLCLTLSMLF 285

Query: 215 NWYNKR 220
               KR
Sbjct: 286 KQVEKR 291